Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1002 ATGGAATCAATTCCTTACACGATCCCTTCTTCCAAGCTCCAATCACTACTTTCTTACAAAACACCCACCAGAACTCGATCCTCCAAGCTCCTCCCTCTTCACCCTCCCCCACTTCCAATCAAACCCTTCTATTATTCACCTAAATGCCTCCCTCTCCGTCACCATCGCCTCCGCTGCCTCGCTCACTCCAACGCTAACCACCACCATCACAGCCACAGCGATCATAACCACCACGAGCACGAGCACGAGCACGACCATCACCATCACCACCACCACCACCACCACCACGCGCATCATGCCATCGACAGCGCTAACCTCACGGGACCACAACGAGCGATCATCGGGTTCGCGAAAGCCACGAGGTGGATGGACTTGGCCGATTTCTTAAGGGAGCACTTGCATCTTTGCTGCTTCTCCACAGCTTTATTCGTGGCAGCTGCCATTTGCCCTCACACTTTGCCAAAGCCTCTCGTTAAGCGCTTCCAACACTCCCTCATCATCCTTGGATTTCCTTTGGTTGGGGTTTCGGCTTCCCTGGATGCTCTAATTGAACTTAGCAGTGGAAAAGTGAACATCCATGTACTAATGGCGATGGCTGCTTTTGCGTCTGTTTTTATGGGGAACTCTTTGGAAGGAGGGTTGCTTCTTGCCATGTTCAATCTCGCGCATATAGCTGAGGAGTACTTCACGGGACGGTCGATGATCGATGTTAAAGAGTTGAAAGAGAATCATCCTGAGTTTGCGCTTGTTCTTGACACCAGTGGTGATAAGCTTCCTAATACATTCAACTTGGCGTACAAGAGTGTTCCTGTGCATGATGTAACTGTAGGATCATATATCCTTGTTGGTGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGCAATGCTACAATTACCATCGAGCACTTGACAGGGGAAATCAAACCATTGGAGGCCAAAATTGGAGACAGGATACCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATTGTAAAGGTAACAAAGACATGGAACGAATCAACCCTAAACCGAATTGTGCAATTGACTGAAGAAGCACAGTTGAATAAACCAAAACTTCAAAGATGGTTGGATGAATTTGGTGAACGTTACAGCAAAGTAGTTGTGGTATTATCAGTTGCAATTGCCGTTATTGGGCCAATTTTATTTAAGTGGCCTTTCATTAGCACACCAGCATGCAGAGGTTCAGTTTACAGAGCCCTAGGGCTCATGGTTGCAGCATCTCCATGTGCTTTGGCTGTGGCCCCATTAGCATATGCAACAGCAATTAGTTCCTGCGCAAGAAAGGGGATATTACTCAAAGGTGGACATGTGTTAGATGCTCTAGCTTCTTGTCATACTATTGCATTTGATAAAACAGGAACATTAACCACAGGAGGACTTCTATTCAAGGCAATTGAGCCCATTTATGGTCATAATGTCAGAAAGAATGAGTCAAACATTTCTTCCTGTTGCATCCCTACCTGTGAGAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCATCCCATTGGAAGGGCTGTTGTTGACCATAGCGAAGGCAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTACTTCCCTGGAAGGGGCCTTATTGCTACTGTTAACAGCATTGAGTCAGGAACTGGAAGTGCTAAGCTATTGAAAGCATCACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCATTCTGAAGAGGAGTCAGAAAAGATCAAGGAAGCTGTTAATACATCTTCCTATGGAAGTGAATTTGTTCATGCTGCTCTTTCGGTTAATAAGAAGGTGACACTTATTCACCTAGAAGATAGGCCTCGTCCTGGGGTTTTTAATGTTATTCAAGAATTGCAGAATGAAGCGATGTTACGGGTGATAATGTTAACTGGTGATCATGAGTGTAGTGCAAGGAGGGTTGCAACTGCTGTGGGCATCAGCGAGTTTCATTGCAACCTGAAACCTGAAGATAAACTGAGTCATGTAAAAGACACATCAAGAGATACAGGAGGAGGCTTAATTATGGTTGGTGAAGGAATCAATGATGCCCCTGCACTTGCTGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCTGATGTGTTATTGCTTCGTGAAAATATTTCTGCAGTGCCATTTTGTATCGCCAAGTCTCGCCAAACAACAACACTGATTAAACAAAATGTGGCTCTGGCATTGTTCTGCATTACCATGGCTTCTCTTCCATCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTTTGTCTCAATTCTATTCGTGCCTTAAACGAACCATCTTGGTCATGGAAGCAGGATTTGTTACATTTGATTGGCGAGGTTAAATCTAGGCTTCTTTCTCTTGGGACAAATATTAAGGGCTCAAGCAACATTACAACGGCGAGTTTATAA 2499 0.4502 MESIPYTIPSSKLQSLLSYKTPTRTRSSKLLPLHPPPLPIKPFYYSPKCLPLRHHRLRCLAHSNANHHHHSHSDHNHHEHEHEHDHHHHHHHHHHHAHHAIDSANLTGPQRAIIGFAKATRWMDLADFLREHLHLCCFSTALFVAAAICPHTLPKPLVKRFQHSLIILGFPLVGVSASLDALIELSSGKVNIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTGRSMIDVKELKENHPEFALVLDTSGDKLPNTFNLAYKSVPVHDVTVGSYILVGAGESVPVDCEVFQGNATITIEHLTGEIKPLEAKIGDRIPGGARNLDGRIIVKVTKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIAVIGPILFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLLFKAIEPIYGHNVRKNESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLIATVNSIESGTGSAKLLKASLGSVDFITSFCHSEEESEKIKEAVNTSSYGSEFVHAALSVNKKVTLIHLEDRPRPGVFNVIQELQNEAMLRVIMLTGDHECSARRVATAVGISEFHCNLKPEDKLSHVKDTSRDTGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTTLIKQNVALALFCITMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPSWSWKQDLLHLIGEVKSRLLSLGTNIKGSSNITTASL* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1002 832 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 192 790 IPR027256 GO:0006812|GO:0016021|GO:0019829
Ahy11g1002 832 PRINTS P-type cation-transporting ATPase superfamily signature 611 622 - -
Ahy11g1002 832 PRINTS P-type cation-transporting ATPase superfamily signature 634 644 - -
Ahy11g1002 832 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Ahy11g1002 832 PRINTS P-type cation-transporting ATPase superfamily signature 688 707 - -
Ahy11g1002 832 PRINTS P-type cation-transporting ATPase superfamily signature 712 724 - -
Ahy11g1002 832 Gene3D - 232 356 - -
Ahy11g1002 832 MobiDBLite consensus disorder prediction 82 99 - -
Ahy11g1002 832 MobiDBLite consensus disorder prediction 65 101 - -
Ahy11g1002 832 CDD P-type_ATPase_HM 136 790 - -
Ahy11g1002 832 Gene3D - 451 739 IPR023214 -
Ahy11g1002 832 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
Ahy11g1002 832 SUPERFAMILY HAD-like 456 788 IPR036412 -
Ahy11g1002 832 SFLD p-type atpase 440 741 IPR044492 -
Ahy11g1002 832 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 62 819 - -
Ahy11g1002 832 SUPERFAMILY Calcium ATPase, transmembrane domain M 194 761 IPR023298 -
Ahy11g1002 832 Gene3D - 469 619 IPR023299 GO:0000166
Ahy11g1002 832 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 585 768 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1002 832 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 266 479 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1002 832 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED 62 819 - -
Ahy11g1002 832 Pfam haloacid dehalogenase-like hydrolase 456 701 - -
Ahy11g1002 832 SUPERFAMILY Calcium ATPase, transduction domain A 266 351 IPR008250 -
Ahy11g1002 832 Pfam E1-E2 ATPase 266 438 - -
Ahy11g1002 832 SFLD Haloacid Dehalogenase 440 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1002 Ahy-Chr11 22179570 22189284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1002 92 813 Primary Pumps ATPases AT4G37270 74.931 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1002 K01534 - gmx:100776309 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1002 11 22179570 22189284 Ahy11g1002 11 22179570 22189284 ECH
Ahy11g1002 11 22179570 22189284 Ahy1g1001 1 17416816 17426494 hybridization