Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0990 ATGTCTCCCACAACTCCCTCCCTTCTCGACACCCTCCTCTGCCAAGAAGAACACGACGACACCTTTGACGACACCCGAAACGACGCGTCGTTCCACCTCAACGACAACCACCACGACGAATCACCGTCGTTTTGCCCCGCAAAGCTCCAATCTTTTCCTCATCCCGTTCTGCATGACAACGACCTGTTCTGGGAACACGACGAGCTCGCCTCCTTAATCTCCAAAGAGGGAGAGACCCACGCCGCCGCTGGTAACGACGACGACCACCGTGATGGACTTCTAGATGGGCTTCGAGTTGGGCCCGTTGGCTGGATCACTAACGTGTGTGCGCACTATGGGTTTTCAGCTTTGACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTCGTCACGAGCCTCACGTTTCAAAGGGATAAGCCATGGATGACTCAGTTAACGGCGGTTGCGTGCTTGTCAATTGCTGCAAAGATGGAAGAGACACATGTGCCCCTCCTCTTAGACCTCCAAGTGGAAGAATCGAGGTTTCTGTTTGAAGCAAAGACAATACAAAGAATGGAGCTTCTTGTGTTGTCTACTCTCAAATGGAAGATGCATCCGGTGACCCCAATTTCTTTCTTTGAACACATTGTTAGAAGGCTTGGCCTCAAGAGTCGCTTGCATTGGGAATTTCTATGGCGGTGCCAGCGGGTTCTTCTTGGCGTCATTGCCGATTCAAGGGTTATGAGTTATCTTCCATCTACATTGGCTGCTGCTACGATGATCCATGTTATTAAAGAGATTGAGCCATTTAATGCAACTAAGTACATTAGTGAACTTCTGGGACTACTCAAGATTAGTGAGGAACAAGGGAACCAGTGCTACAAACTCTTGCTGAAATCATTAGTTTGCGAAGAAGGTATTACTGACTGTCTTCACCAGATGCACAAGCGCAAGCGCAACCGCGAATCTGCCCCGAGTAGCCCGGGAGGTGTCATTGATGCTTCTTTCAGTTGTGAAAGCTCAAACGATTTGTGGGCCGTTGCGGCATCGTCGGTTTCACATTCGATGGAGCCGCTGTTTAAGAGGAGCAGAGCTAAGGACCAGCAGATGAGACTGCCTTCTGTTAGTCGCGTGTCTATCGATGTTCTTAATAGCCCTCATTAA 1143 0.4969 MSPTTPSLLDTLLCQEEHDDTFDDTRNDASFHLNDNHHDESPSFCPAKLQSFPHPVLHDNDLFWEHDELASLISKEGETHAAAGNDDDHRDGLLDGLRVGPVGWITNVCAHYGFSALTTVLAVNYFDRFVTSLTFQRDKPWMTQLTAVACLSIAAKMEETHVPLLLDLQVEESRFLFEAKTIQRMELLVLSTLKWKMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCQRVLLGVIADSRVMSYLPSTLAAATMIHVIKEIEPFNATKYISELLGLLKISEEQGNQCYKLLLKSLVCEEGITDCLHQMHKRKRNRESAPSSPGGVIDASFSCESSNDLWAVAASSVSHSMEPLFKRSRAKDQQMRLPSVSRVSIDVLNSPH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0990 380 SMART Cyclin_C_2 200 322 IPR004367 -
Ahy11g0990 380 SMART cyclin_7 103 191 IPR013763 -
Ahy11g0990 380 SUPERFAMILY Cyclin-like 66 198 IPR036915 -
Ahy11g0990 380 Pfam Cyclin, N-terminal domain 96 197 IPR006671 -
Ahy11g0990 380 Gene3D - 199 288 - -
Ahy11g0990 380 Pfam Cyclin, C-terminal domain 200 298 IPR004367 -
Ahy11g0990 380 PANTHER CYCLINS 39 364 IPR039361 -
Ahy11g0990 380 CDD CYCLIN 97 190 IPR013763 -
Ahy11g0990 380 Gene3D - 96 198 - -
Ahy11g0990 380 PANTHER CYCLIN-D3-2 39 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0990 Ahy-Chr11 21778015 21780076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0990 61 370 Core Cell Cycle Gene Families AT5G67260 51.111 5.95e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0990 K14505 - gmx:100785030 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0606 15 7688950 7691556 Ahy11g0990 11 21778015 21780076 ECH
Ahy17g3258 17 134724152 134725527 Ahy11g0990 11 21778015 21780076 ECH
Ahy16g3491 16 152326985 152329557 Ahy11g0990 11 21778015 21780076 ECH
Ahy11g0990 11 21778015 21780076 Ahy11g0990 11 21778015 21780076 ECH
Ahy11g0990 11 21778015 21780076 Ahy1g0991 1 17057546 17059575 hybridization
Ahy11g0990 11 21778015 21780076 Ahy5g0604 5 7705357 7707861 PCT