Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0946 ATGACAATGACGGAAACGCCCATGGCCGAGCAACAACAACAAAACGAACTGAACGGTCACAAAGATCTCAATCACAAGAGTCTCCTTCAGAGCGATGCACTCTACCAGTATGTACTTGAAACAAGTGTGTATCCAAGAGAACACGAGAGCTTGAAGGAGCTCCGTGAGATGACACAAAACCACCCTCGTAACATCATGGCTACACCACCGGACGAAGGACAACTGATAATGATGTTGGTTAAACTCATAAACGCCAAGAACACCATGGAAATTGGCGTCTACACTGGTTACTCTCTGCTTTCTACTGCCCTTGCTCTTCCTCATGATGGAAAGAAAAATAACATGGGAAAATATGATTTTGTTTTCGTGGACGCGGATAAGAACAACTACTTGAACTACCATAAGAGGGTGATTGAGCTTGTGAGGATTGGAGGGTTGATCGGCTATGATAACACCCTATGGTTTGGATCTGTGGCTCAGCCACCTCATGCACCAATGATGGATTTTGTGAAGAACTCTCGCGGTTATGTGATGGAACTCAACAAGCACCTTGCTAGTGATGAAAGAATTGAAATTTGTCAAATCCCTGTTGGTGATGGCATTACCTTGTGCCGCCGTATCATCTGA 627 0.4466 MTMTETPMAEQQQQNELNGHKDLNHKSLLQSDALYQYVLETSVYPREHESLKELREMTQNHPRNIMATPPDEGQLIMMLVKLINAKNTMEIGVYTGYSLLSTALALPHDGKKNNMGKYDFVFVDADKNNYLNYHKRVIELVRIGGLIGYDNTLWFGSVAQPPHAPMMDFVKNSRGYVMELNKHLASDERIEICQIPVGDGITLCRRII* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0946 208 PANTHER O-METHYLTRANSFERASE-RELATED 112 208 - -
Ahy11g0946 208 Gene3D Vaccinia Virus protein VP39 112 207 IPR029063 -
Ahy11g0946 208 PANTHER O-METHYLTRANSFERASE-RELATED 10 112 - -
Ahy11g0946 208 Gene3D Vaccinia Virus protein VP39 16 111 IPR029063 -
Ahy11g0946 208 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 207 IPR002935 GO:0008171
Ahy11g0946 208 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 206 IPR029063 -
Ahy11g0946 208 Pfam O-methyltransferase 40 111 IPR002935 GO:0008171
Ahy11g0946 208 Pfam O-methyltransferase 113 207 IPR002935 GO:0008171
Ahy11g0946 208 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 10 112 - -
Ahy11g0946 208 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 112 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0946 Ahy-Chr11 19260093 19264509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0946 9 207 Monolignol Biosynthesis Gene Families AT4G34050 57.202 6.95e-96 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0946 K00588 - gmx:100799303 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0946 11 19260093 19264509 Ahy1g0958 1 14929743 14934891 hybridization