Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0936 ATGGATTGGGTAAGAGGAGACCCTGTTGGTCGAGGAAGCTTCGCCACGGTTAGTTTAGCGTTTTCAAAAAACGGTTCTGCTGATAAATCTTTGGTTTCTCCCACCGCCGTGAAGTCCTGCGAGGTTGGAGCCTCCTACTGGCTCAAGAACGAGAAACACGTGCTCGACCGTCTCGGCAACACGTGCCCACGAATCATCACGTGCTTTGGCGATGATTACACCTTGGAGAATGGCCGCCAATACTACAACCTCTTCCTGGAGTACGCCTCCCGAGGCAGCCTCTCGGATGAGCTTAACCGCCGCGGAGGGTGTATCCCAGAGCTCGAAGTTCGACATCACGTGAAGTCTATCGTGGAAGGCCTCATCCATATTCACAACACTGGATTCGCCCACTGCGACATAAAGCTTCAAAACATACTCATGTTCGAAAACGGTCAGGTTAAGATTGCGGATTTTGGTCTAGCGAAAGAAACAGGGGAGAAACAGGGGAATGAGAAGAAAAATAAGTGTTTCGAATGCAGGGGAACTCCTATGTTTATGCCGCCGGAATTGGTTAACAACGGCGAGTGCGAGTCTCCGGCGGATATTTGGGCCTTGGGGTGTACTGTAATAGAGATGGTAACTGGTAAGCCGGCATGGAACATTGCAAAAGATTCGAATATTTGGTCCTTGATGCTTCGAATCGGAACAGGGGAAGAAGTACCTTGTATTCCAAATGAAATTTCAAAAGAAGGGAAGGATTTCTTGGACAAGTGTTTTGTTAAAAATCCTAAGAAGAGATGGACGGCTGAAATGCTTTTGGATCATCCGTTTCTCGCTTCTCATACTGTTTCATTGAAAGCTGACTTCATGGCTAATAATTATTCGCCGCGAAGCCACTTTGATTTCCCAGACTGGGTTTGTTCTGTTCCAAGCTCTCACGAGCCACAGTCAAATTTTAATTTTGATTCGTTTTCGGCCGTGAATCGAATTCAGAGGCTTGCAACAAAGGATCGAGTGCGGGAGAATTGGCCGGAATCTGATGGTTGGACTTGGACCAGTATCAGGGGAAATTAA 1056 0.4735 MDWVRGDPVGRGSFATVSLAFSKNGSADKSLVSPTAVKSCEVGASYWLKNEKHVLDRLGNTCPRIITCFGDDYTLENGRQYYNLFLEYASRGSLSDELNRRGGCIPELEVRHHVKSIVEGLIHIHNTGFAHCDIKLQNILMFENGQVKIADFGLAKETGEKQGNEKKNKCFECRGTPMFMPPELVNNGECESPADIWALGCTVIEMVTGKPAWNIAKDSNIWSLMLRIGTGEEVPCIPNEISKEGKDFLDKCFVKNPKKRWTAEMLLDHPFLASHTVSLKADFMANNYSPRSHFDFPDWVCSVPSSHEPQSNFNFDSFSAVNRIQRLATKDRVRENWPESDGWTWTSIRGN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0936 351 ProSiteProfiles Protein kinase domain profile. 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g0936 351 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524
Ahy11g0936 351 Gene3D Transferase(Phosphotransferase) domain 1 2 329 - -
Ahy11g0936 351 SUPERFAMILY Protein kinase-like (PK-like) 3 309 IPR011009 -
Ahy11g0936 351 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 311 - -
Ahy11g0936 351 CDD STKc_MAPKKK 2 272 - -
Ahy11g0936 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Ahy11g0936 351 SMART serkin_6 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g0936 351 Pfam Protein kinase domain 6 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g0936 351 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0936 Ahy-Chr11 19097045 19098591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0936 1 299 MAP Kinase Kinase Kinase AT4G36950 56.291 1.10e-111 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy11g0936 Pkinase 2.10E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0936 - - aprc:113858661 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0936 11 19097045 19098591 Ahy11g0936 11 19097045 19098591 ECH
Ahy11g0936 11 19097045 19098591 Ahy1g0948 1 14704178 14705732 hybridization
Ahy5g0637 5 8330999 8332336 Ahy11g0936 11 19097045 19098591 PCT
Ahy11g0936 11 19097045 19098591 Ahy5g0637 5 8330999 8332336 PCT