Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0933 ATGGACGTTGACATGGTCTCAACTACAATGATGATGCAACTAGAACGGTTACCTGAATTCTCCGAATCTTTTTACACCTCAATTCCCAATCAAGGAAGCGACTTCTCCGGTGGCCAAACCCTATTCACCGCACCACCAGCACCGCCGTGTTTGATTGATCCACCGCCGTCCAACAACGTCAACTTCCCCATCCAACACCAACCGATTGCATTCAGGAACCCTTACCATTGTTCTTCCTCATCGTCGGCGGAGAAGAAGAGTTCAATGGCGGCAATGAGGGAAATGATATTCCGAATAGCGGTTATGCAGCCGGTCCACATAGACCCGGAATCCGTAAAGGCGCCGAAGCGGAGGAACGTGAAGATCTCGAAGGATCCGCAGAGCGTGGCGGCGAGGCACCGGAGAGAAAGGATAAGCGAGAAGATAAGGATCTTGCAGCGGTTGGTGCCAGGTGGCACCAAAATGGACACTGCTTCCATGTTGGATGAAGCTGTGCACTATGTCAAGTTCTTGAAGAAGCAGGTGCAGACGCTGGAACAAGCAGAAGCAAGTAGAATAACAAGAACCCTTGGTGTTGGGTTTTCTTCTTCTAATAACAATGGCAATCATGTGAATTACGATGCTTTTTCTTTCAAGGGTAGTAGTAGTAGTTGCCAACAACTTTGTCATAATATTGTGGGTTCTACTTCTTCTTCCAAGTTACTCAGCTGA 711 0.481 MDVDMVSTTMMMQLERLPEFSESFYTSIPNQGSDFSGGQTLFTAPPAPPCLIDPPPSNNVNFPIQHQPIAFRNPYHCSSSSSAEKKSSMAAMREMIFRIAVMQPVHIDPESVKAPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKKQVQTLEQAEASRITRTLGVGFSSSNNNGNHVNYDAFSFKGSSSSCQQLCHNIVGSTSSSKLLS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0933 236 Pfam Helix-loop-helix DNA-binding domain 132 171 IPR011598 GO:0046983
Ahy11g0933 236 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 218 IPR045843 GO:0003700|GO:0006355
Ahy11g0933 236 SMART finulus 128 177 IPR011598 GO:0046983
Ahy11g0933 236 Gene3D - 121 190 IPR036638 GO:0046983
Ahy11g0933 236 PANTHER TRANSCRIPTION FACTOR HEC2 1 218 - -
Ahy11g0933 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 181 IPR036638 GO:0046983
Ahy11g0933 236 CDD bHLH_AtIND_like 123 179 - -
Ahy11g0933 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0933 Ahy-Chr11 18991387 18992467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0933 4 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 59.788 5.05e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy11g0933 HLH 1.10E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0933 - - gmx:100796649 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0933 11 18991387 18992467 Ahy11g0933 11 18991387 18992467 ECH