Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0890 ATGTCGTCGACGAATTCCCCATGCGCGGCGTGCAAGTTCCTTCGTCGGAAGTGCACACAAGAGTGCATTTTCGCACCATACTTCCCGCCGGACAACCCACAGCGCTTCGCATGCGTCCATCGCGTCTTCGGCGCCAGCAACATCGGCAAGATCCTCAACGATCTTAGCCCCTGCCAGCGGGAAGATGCGGTGACGTCCCTTGCGTTCGAGGCGGAGGCGCGCCTCGACAGCCCAGTGTACGGGTGCGTCAGACACATCGTCATCCTTCAACAGCGCCTGCAACAAATACAAATGGACCTCCTCCACGCCAAGAGCGAACTCAGCGCCTACATCAACCCACAAGGCATTCAGGGTCCGTTCTCCCCTCATGGAATTCGAGGGCTCCCACTTTACCCTCAAGGAAAGCCGCCGTCTTCGTCTGCGGCTCTTTTCGGCCCGCCTTACGGCCCAAATGTTATTCAGTCTTTGATGCCACCATCTTCTGTGCAGCATAATGGAACAATGATTGCTAATGCCGACCTGGATCCAGAGCAGCGCGAGTTGTTGGAGGCCCAACAACTCGCAGCACAGCAACATGACATGATGGTCAGAAACTATGAACATCAGCATCAGCAAGAGTATCTAAGATACAACGGTGCTACTGGGATTATTGAACCTGTGGCAGCTGCAAGTCCGGTTTCAGTTGTCACAGCCGACGGCGATGGCCGTGGAAGTGGAGTTTTTGCCCAGATGGCTGCACATTCAGGCGCTCAAGGAGGTGAACTGGCACCTTCTTTGGGTTTGGGGACATTTGACAGTGGTGGAACTTATCATCATCAGTTGCAACAACAACCACCACAACATGGAGGAGTAGGGGAAAATTATGTTGGTCTTGCAAATCGTCATCACTATCCTGTTGAGGCGCAATTCCTGCTCCCATCACAACAACAACAACCGTTAGAGAGTGAGGACTGTAAGAGTGTCGGCCCTTCTTCATGA 978 0.5358 MSSTNSPCAACKFLRRKCTQECIFAPYFPPDNPQRFACVHRVFGASNIGKILNDLSPCQREDAVTSLAFEAEARLDSPVYGCVRHIVILQQRLQQIQMDLLHAKSELSAYINPQGIQGPFSPHGIRGLPLYPQGKPPSSSAALFGPPYGPNVIQSLMPPSSVQHNGTMIANADLDPEQRELLEAQQLAAQQHDMMVRNYEHQHQQEYLRYNGATGIIEPVAAASPVSVVTADGDGRGSGVFAQMAAHSGAQGGELAPSLGLGTFDSGGTYHHQLQQQPPQHGGVGENYVGLANRHHYPVEAQFLLPSQQQQPLESEDCKSVGPSS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0890 325 MobiDBLite consensus disorder prediction 306 325 - -
Ahy11g0890 325 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Ahy11g0890 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 1 278 - -
Ahy11g0890 325 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Ahy11g0890 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0890 Ahy-Chr11 17311245 17312222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0890 1 271 AS2 family AT5G66870 42.807 4.26e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy11g0890 LOB 9.90E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0890 - - aip:110262357 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0890 11 17311245 17312222 Ahy11g0890 11 17311245 17312222 ECH
Ahy11g0890 11 17311245 17312222 Ahy1g0011 1 172767 174084 hybridization
Ahy5g0676 5 8916062 8918618 Ahy11g0890 11 17311245 17312222 PCT