Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0889 ATGTACGCAGAAAAGGATAAAAAAGAAAGAAGAATGTCATCGACGCCTACACCATGCGCGGCATGCAAGTTTCTTCGTCGGAAGTGCACACCGGAGTGCATTTTCGCACCGTACTTCCCAGCGAACAACCCAGAGCGCTTCGAATGCGTCCACCGCGTCTTCGGCGCCAGCAACGTCGGCAAGATCCTCAACGAGCTACCTCCATCCCAGCGCGAGGATGCGGTGAAGTCCCTTGCGTTCCAGGCGAAGGCACGCCTTCGCAACCCGGTCTATGGCTGCACCTTCCAAGTCTCCATCCTCCAGCAGCTCCTCCGCCAGAGACGTGCCGTCCTCGAAAACGCCAAGAGAGAACTTAGCGCCTACATCAACCCGCAAGCCATTCAAGGTCCATTCAACCCTCAGGAAAAGCCTCTATCTTCATCTCCCGCCCATTTAGGCCCTTCCTGCTGCTCCAATATTGTACAGTATTCAGCCCATTTAAACCCATTCTACGATCCAAATGTTGTACACTCTTCAGTCCATTTGGGCCTATCGGACGGCCCAGATGATGAACCTTTTTTTAAGCCAGCTATCCAGTATAATGGGTCATTGGGTGGTGGTGGTGCTGTCCCGCAAGCGGACCCAGGGCAACAAGAGTTGTTGGAGGCCCAACAACTTGCTGCTGCTGTGGCATTCCGAGAACAGCAACTAAGATACAATGCTGCTGCTGGGATTGAACCTGTTGCGGCTGCAGCACCCTACGGCGGTAACGTCAGTGGAAGTGGAGTGTTTGGCCACATGGGTGCACCTTCAGGCGGTCAAGGAGGTGAGATGGCACCTTGTATGGGTTTGGGGACATTTGATAGTGGTGAAAGTTATCATTCACAATTGCAACAACCACCACAGCATGGAGTAGGGGGAAATTACGTCCTTGCAACTCAACATCACTACCCTCTTGAGGGCCAGTTGCTGCTCCCATCAGAGCACCAAGCACTACCTTTAACCCTACAACAACAACAGCAACTAGAACTACAAGTATTGCAACAACAACTAGAACTACAACTATTACAACAACAACAACAACTAGAACTACAACTATTACAACAACAACAGGAGCAGCAGCAACTACAACAACTGTCAGAGAGTGAAGACAGTAAGAGTGTCGGCCCTTCTTGA 1155 0.5108 MYAEKDKKERRMSSTPTPCAACKFLRRKCTPECIFAPYFPANNPERFECVHRVFGASNVGKILNELPPSQREDAVKSLAFQAKARLRNPVYGCTFQVSILQQLLRQRRAVLENAKRELSAYINPQAIQGPFNPQEKPLSSSPAHLGPSCCSNIVQYSAHLNPFYDPNVVHSSVHLGLSDGPDDEPFFKPAIQYNGSLGGGGAVPQADPGQQELLEAQQLAAAVAFREQQLRYNAAAGIEPVAAAAPYGGNVSGSGVFGHMGAPSGGQGGEMAPCMGLGTFDSGESYHSQLQQPPQHGVGGNYVLATQHHYPLEGQLLLPSEHQALPLTLQQQQQLELQVLQQQLELQLLQQQQQLELQLLQQQQEQQQLQQLSESEDSKSVGPS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0889 384 Coils Coil 332 372 - -
Ahy11g0889 384 Pfam Lateral organ boundaries (LOB) domain 18 114 IPR004883 -
Ahy11g0889 384 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
Ahy11g0889 384 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 15 151 - -
Ahy11g0889 384 Coils Coil 97 117 - -
Ahy11g0889 384 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 15 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0889 Ahy-Chr11 17302274 17304189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0889 12 163 AS2 family AT5G66870 53.947 4.23e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy11g0889 LOB 4.00E-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0889 - - ahf:112710769 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0889 11 17302274 17304189 Ahy11g0889 11 17302274 17304189 ECH