Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0842 ATGGGAATAGCAACACCGCCACCATTTCCTTCCATTCTCTCTCACTCAAAGACTAATAACTACCAGCAGCACCATTCTTTCACCATAATCGAAAAGCCTGAAGAAGAAGAAGAAGAAGAATTAAACGCTTCCAATTCTATGTCCCAAGATTACCACCACCACAATCAAGGAATCTTCACCTTCTCCAATAATGGGTTCGAGAGATCCACACAGGTAACAAACCAAGAACACCATCACCAACATCAACACCACTTGGCTCAGCAAATTCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGATCCACAGCAACCGCCTCCGGCACAGCCACCAACAGCCATAATTGGGATAGAAGAATCCGGAGGCATCCCGGGGTATGAAACTGCCGGGATGCTATCGGAGATGTTCAATTTCCCGCCGGTTGCAGATGCTGCGGCCGGGGAATTATTGGAGCAGCCAATGATAGCGACGTTTCGTTCCCCAACAACGACGAGGTCATTGGGTAGCGATTGGTATGCTGGAAACAGACAAGGGATGATAACCGGGTTGGGAGCGTTGGGAGATAATTCAAAGAATAATCATAATCAACATGATCAAAGTAATTTGAATAACGGTGACAGTGGTGTCATAGTTCATCATCAACAACCACAGCAGCATCATCATCATAATCAGATTCCAAGCATTAATGCCGATTCGGCTGCAGCCATGCAACTTTTTCTCATGAACCCACAAACCACCACCAGATCACCTTCCCCTCCGTCGTCCCATCACACCACACCCACTCCTCCTTCGTCTTCTTCGACGCTTCACATGCTTCTTCCTAATCCTAATCCCAATACTTCCGTACAAGGCTTCCATGGCGGTGGTGGTACCTTCAACCAATTCACATGGGCCCCTGACAGTGCTCAAGAAGCTCAAGGCCTCTCTTTATCCTTATCCTCTTCGTTACAGCACCTGGAAGCCGCGAAAGCCGAGGAATTGAGGATGGGAGAAAGTGGTTTCCTCTTTTACAACCAAGGAGGTGGTGGTCCTTCATCTTCCTCTTCTTCTGCTCAGTATCCTTACAAGAATCTCCCTAGCCATCACCAACAACACCAAGCATTGCATATTCAAGGAACGTCGTTGGGGCAGAATCACCACCAAGGACCCATTGGGTTTGGATCATCTTCGTCTTTGGGTCTAGTCAACGTCCTCAGGAATTCCAAGTATGTCAAGGCCGCTCAGGAGTTGCTTGAAGAGTTCTGCAGCGTTGGGAGGGGTCAGTTCAAGAAAAACAAGTTCACTAGGCAGCTCTCAAACCCTAGCTCCAATCAAGGTGGCGCCGCCGCCGCTTCTTCATCTTCGTCAAAGGAACTTCCTCCTTTGTCAGCTTCTGATAGGATCGAGCATCAAAGGCGGAAGGTCAAGCTTCTCACCATGCTTGATGAGGTGGACCGTAGGTACAGTCACTACTGCGAGCAAATGCACATGGTGGTGAACTCGTTCGACCTGGTGATGGGGTACGGGGCGGCGGTACCGTACACGGCGCTGGCGCAGAAGGCGATGTCGCGGCACTTCCGGTGCCTGAAGGATGCAATAACGACGCAGTTGAAACACAGCTGCGAGGTTCTTGGAGAGAAGGAAGGGGTGGGGACGACGGGGCTGACGAAGGGGGAGACGCCGCGGCTGAAGATGCTGGAGCAGAGCTTGAGGCAGCAGAGGGCGTTCCACCAAATGGGGATGATGGAGCAGGAGGCTTGGAGACCCCAAAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTATTCGAGCATTTTCTTCACCCGTACCCAAGCGATGCAGATAAGCATCTCTTAGCAAGACAGACTGGGTTATCAAGAAATCAGGTATCAAACTGGTTTATTAACGCCAGGGTTCGTTTGTGGAAACCCATGGTTGAAGACATGTACCAACAAGAACTCAAAGATGCAGAGGGTGCAACAGAAGAAGAAGACGACGAAGGAGAAAGCAACAACAATAGTGGCAATCATGTACAAACTCCACTGCCACCATCATCAACAACTACAACACCACCACCACTTCAATTATCATCGTCAACACCAACAAGTAATAATAACAACAATGTTAATAAAAGATCAGATATTATCATCAATGCCCAAGATAGTGACCCTTCATTAGCAGCAATTAATAGACAAGGCTTAGAAATTCAAGCAAAGCAGCCAGCTACAAGTTCCACCGCCAACACCACCGTCACCCCACCTGTAGTGTCACAGTGTTTTGACTCAGAGCAGCTACTAAATGAGGATACGTGTGGCCACGGAAGCATAGTGAGTGCAGAATATGGAAGTGTTGCTGCAATGACTGAGATAGGGTCTTCTTCAAGTACTCTCATCAGGTTTGGGACAACAGCTGCACCCGGCGATGTGTCACTCACGCTGGGGCTACGACACACTGGGAACAACTCCTTTCTCCATTAG 2463 0.4913 MGIATPPPFPSILSHSKTNNYQQHHSFTIIEKPEEEEEEELNASNSMSQDYHHHNQGIFTFSNNGFERSTQVTNQEHHHQHQHHLAQQIRRDKVRVQGFDPQQPPPAQPPTAIIGIEESGGIPGYETAGMLSEMFNFPPVADAAAGELLEQPMIATFRSPTTTRSLGSDWYAGNRQGMITGLGALGDNSKNNHNQHDQSNLNNGDSGVIVHHQQPQQHHHHNQIPSINADSAAAMQLFLMNPQTTTRSPSPPSSHHTTPTPPSSSSTLHMLLPNPNPNTSVQGFHGGGGTFNQFTWAPDSAQEAQGLSLSLSSSLQHLEAAKAEELRMGESGFLFYNQGGGGPSSSSSSAQYPYKNLPSHHQQHQALHIQGTSLGQNHHQGPIGFGSSSSLGLVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFTRQLSNPSSNQGGAAAASSSSSKELPPLSASDRIEHQRRKVKLLTMLDEVDRRYSHYCEQMHMVVNSFDLVMGYGAAVPYTALAQKAMSRHFRCLKDAITTQLKHSCEVLGEKEGVGTTGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKDAEGATEEEDDEGESNNNSGNHVQTPLPPSSTTTTPPPLQLSSSTPTSNNNNNVNKRSDIIINAQDSDPSLAAINRQGLEIQAKQPATSSTANTTVTPPVVSQCFDSEQLLNEDTCGHGSIVSAEYGSVAAMTEIGSSSSTLIRFGTTAAPGDVSLTLGLRHTGNNSFLH* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0842 820 MobiDBLite consensus disorder prediction 185 223 - -
Ahy11g0842 820 ProSiteProfiles 'Homeobox' domain profile. 576 639 IPR001356 GO:0003677
Ahy11g0842 820 Gene3D - 582 644 - -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 70 120 - -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 428 453 - -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 1 23 - -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 649 705 - -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 184 223 - -
Ahy11g0842 820 Pfam Homeobox KN domain 596 635 IPR008422 GO:0003677|GO:0006355
Ahy11g0842 820 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 114 816 - -
Ahy11g0842 820 Pfam Associated with HOX 396 526 IPR006563 -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 686 705 - -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 428 459 - -
Ahy11g0842 820 MobiDBLite consensus disorder prediction 243 286 - -
Ahy11g0842 820 SMART prehox3 391 527 IPR006563 -
Ahy11g0842 820 SUPERFAMILY Homeodomain-like 581 646 IPR009057 -
Ahy11g0842 820 SMART HOX_1 579 643 IPR001356 GO:0003677
Ahy11g0842 820 MobiDBLite consensus disorder prediction 72 97 - -
Ahy11g0842 820 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 114 816 - -
Ahy11g0842 820 CDD homeodomain 579 640 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0842 Ahy-Chr11 15794530 15807632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0842 44 626 Homeobox Transcription Factor Family AT4G36870 48.131 3.95e-139 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy11g0842 POX 4.70E-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0842 - - qsu:111998170 820.461