Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy11g0820 | ATGACCAACAGAAAGGATATGCTTGATGAGGCTCTCTTAAGACCAGGGCGGTTGGAAGTCCAGGTTGAGATAAGCCTTCCTGATGAAAATGGTCGATTGCAAATTCTTCAAATTCATACTAACAAGATGAAAGAAAATTCTTTTCTTGCTCCTGATGTGAATCTTCAAGAGCTTGCTGCTAGAACAAAAAACTACAGTGGTGCAGAACTTAAAGGTGTTGTGAAAAGTGCCGTCTCATATGCTTTAAGTCGACAACTGAGTCTAGAGGATCTCACGAAGCAAGTTGAGGAAGAGAATATTAAGGTTACCGAATTCTGGAACAGCAACTTCAAAAACACATATCTCAAGACTCTGAAACTCTTTGGAGGTGCAACCAAAGAGGGGTGA | 387 | 0.4083 | MTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELKGVVKSAVSYALSRQLSLEDLTKQVEEENIKVTEFWNSNFKNTYLKTLKLFGGATKEG* | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy11g0820 | 128 | PANTHER | BNAA03G50350D PROTEIN | 1 | 103 | - | - | |
| Ahy11g0820 | 128 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 88 | IPR027417 | - | |
| Ahy11g0820 | 128 | Gene3D | - | 27 | 115 | - | - | |
| Ahy11g0820 | 128 | Gene3D | - | 1 | 26 | IPR027417 | - | |
| Ahy11g0820 | 128 | Pfam | AAA+ lid domain | 52 | 98 | IPR041569 | - | |
| Ahy11g0820 | 128 | PANTHER | VESICULAR-FUSION PROTEIN NSF | 1 | 103 | IPR039812 | GO:0016887|GO:0035494 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy11g0820 | Ahy-Chr11 | 15121679 | 15124947 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy11g0820 | 2 | 92 | Calmodulin-binding Proteins | AT3G56690 | 39.560 | 1.78e-14 | 67.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy11g0820 | K06027 | - | aip:107625802 | 251.521 |