Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0785 ATGGCGGGGTTGTTCTCGTTAGGAGGCGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTAGCAGCGGAAACCACCAGGACCAGGAACAGCAACACCAGCACCACAGTCAAAACACCGAAATTCCTCCTCCAGAGACCTTATTTTGGTACAAACAAAACGACGACGTTTCAACATACCGCGGTTTCGAGCTATGGAACCAGCATCAGCTTCAGCAGCAACAGCAGCAACATCACGTGATAGCACATCACCATCAAGCCCGCCCTCTCTTCCACCGAGATCTCTACTCGTCGGCTGTTGCCCTTGGCGTGGGGCCCAGCGGCGCGTCCGATGAGCAGTCTCCGTCGAGATCGGCGGTTATGGCGATGCGGTCCGCCGGGGTGGGAGAAGCCGGAGGAGCAGGAAGCGGAACAACCGGAATAAGCTGTCAAGATTGCGGAAACCAGGCGAAGAAAGACTGCCCTCACATGAGGTGCAGGACTTGTTGCAAGAGTCGTGGGTACGACTGCCAGACCCACGTGAAGAGCACGTGGGTCCCAGCCGCTAAGCGCCGCGAGCGGCAACAGCAGTTAGCGGCGCTTCAGGATCACCAGAACAGAGATGCTTCAAAGAGACCTAGAGATGGCGGGTTAGAGCTTGAGCAAGGAAATTTTCCATCAATAGTGAACTCTCCTGCAGAGTTCAGGTGCGTGAGGGTTAGTCCCTTGGATGATGTGAATGAACAGTACGCTTATCAAACCGCCGTCAACATCGGAGGCCATTTGTTCAAAGGGATTCTCTATGACTACGGTCCGGACAGCGAAAATGCTAGCTACTACGGTGGTGGCAGCGGAGGCGGCGAGGGTTCTTCTTCCGCTATTGCTGGAGCTCAGCCCTTGAACCTCATCACCGGCACTGATTCTGCCACCACCGCAACCGCAACCGCCCCGGGTGTGTCGTCTGCAGAGGCTCTTGATGTTGATCCTTCGTCGTTGTACAATCCAGCTCCAATTAATACATACATGGCTGGTAGTAGCGGTACGCAATTCTTCCCTCATCATCCAAGATCTTGA 1056 0.553 MAGLFSLGGGGGGGGGGGGGRGSSGNHQDQEQQHQHHSQNTEIPPPETLFWYKQNDDVSTYRGFELWNQHQLQQQQQQHHVIAHHHQARPLFHRDLYSSAVALGVGPSGASDEQSPSRSAVMAMRSAGVGEAGGAGSGTTGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPAAKRRERQQQLAALQDHQNRDASKRPRDGGLELEQGNFPSIVNSPAEFRCVRVSPLDDVNEQYAYQTAVNIGGHLFKGILYDYGPDSENASYYGGGSGGGEGSSSAIAGAQPLNLITGTDSATTATATAPGVSSAEALDVDPSSLYNPAPINTYMAGSSGTQFFPHHPRS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0785 351 MobiDBLite consensus disorder prediction 1 47 - -
Ahy11g0785 351 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 143 185 IPR006510 -
Ahy11g0785 351 MobiDBLite consensus disorder prediction 182 219 - -
Ahy11g0785 351 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 348 IPR007818 GO:0003700|GO:0006355
Ahy11g0785 351 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 219 266 IPR006511 -
Ahy11g0785 351 Pfam Domain of unknown function (DUF702) 141 267 - -
Ahy11g0785 351 PANTHER PROTEIN SHORT INTERNODES 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0785 Ahy-Chr11 13940146 13943403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0785 1 351 C2H2 Transcription Factor Family AT3G51060 45.000 9.09e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy11g0785 DUF702 6.70E-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0785 - - ahf:112720334 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0785 11 13940146 13943403 Ahy1g0101 1 1444436 1447717 hybridization