Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0766 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGATAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATCCTCCTAAGACTCTTTCTTGGACAAAAGAAGATGCATACATACCAAAATATTATTATACTTCTTCTATTGATCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGCTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTTCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGGACCTGGTTGCTCCTCACTGGGTTTCGGTGCATTTGAGGAGTTGGGACCCTTCAGAGTCAACCCTGATGGTCAAACCCTATACCGCAACCAATTTTCCTGGAACGAAGTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACGCACAAAATGATTCACAAACATTTTTCCATACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGCTATCAACCTTCAAGGCATTGCTATAGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGAGATACTGTGACTTCAAATCCCAATCCGTTTCCTCTATTTGTATCAATGCAACAAGAAATGCCTTCGCTGAGAAAGGACCCATTGACTCCTATAATATATACGCACCACTGTGTCACGACACCTCTCTCAAATCTTCTCAAACTGGTTCTGTATACAATTACGACCCATGCTCTAATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAACAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCAGTTTGTTTCAGTGGAAGGACAGCCCAGTTACAGTCCTACCCCTCATCAAGAAGCTCATCGACCACAATATTAATGTCTGGATATACAGTGGTGATGTAGATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGCATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTAGTTCACCAAAATGA 1509 0.4341 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENPPKTLSWTKEDAYIPKYYYTSSIDPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNAGRDLFYYFVESPANFSQYNPLVLWLNGGPGCSSLGFGAFEELGPFRVNPDGQTLYRNQFSWNEVANVLFLESPAGVGFSYAQNDSQTFFHTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSAINLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIERYCDFKSQSVSSICINATRNAFAEKGPIDSYNIYAPLCHDTSLKSSQTGSVYNYDPCSNVYVQAYLNRPEVQQALHAKPTQWSHCSLFQWKDSPVTVLPLIKKLIDHNINVWIYSGDVDSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLAFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPSSPK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0766 502 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Ahy11g0766 502 Gene3D - 359 389 - -
Ahy11g0766 502 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Ahy11g0766 502 Pfam Serine carboxypeptidase 93 492 IPR001563 GO:0004185|GO:0006508
Ahy11g0766 502 Gene3D - 399 493 - -
Ahy11g0766 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Ahy11g0766 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Ahy11g0766 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Ahy11g0766 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Ahy11g0766 502 PANTHER CARBOXYPEPTIDASE 22 496 - -
Ahy11g0766 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 496 IPR001563 GO:0004185|GO:0006508
Ahy11g0766 502 SUPERFAMILY alpha/beta-Hydrolases 80 496 IPR029058 -
Ahy11g0766 502 Gene3D alpha/beta hydrolase 77 342 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0766 Ahy-Chr11 13492921 13498103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0766 367 495 Calmodulin-binding Proteins AT2G22960 29.927 7.38e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0766 K16297 - gmx:100779407 680.633