Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0704 ATGATGGAAAATATTAATAAAGATGCAGAGAACGATGCAAACAGTTTCACTGCAATGAGGGGAAGCATGGAAGCAGGTGACGGCTGCTGTGGCGATAGCGGTGGTGCGACGGCTGCGGGAGATGAGGTGGCTTTGAAAAAAGGTCCTTGGACAGCCGCAGAGGATGCAATTTTAGTTGATTACGTAACGAAACACGGTGAAGGGAACTGGAATGCTGTACAAAGAAACACAAAGTTGGCTCGATGTGGAAAGAGTTGTAGGCTAAGATGGGCTAACCATTTGAGACCAAATTTGAAGAAAGGTGCTTTCTCCCCTGAAGAAGAAAAGCTCATCATTGAACTCCATGCTCAGTTTGGAAACAAATGGGCTCGAATGGCTGCATTGTTACCTGGAAGAACTGACAACGAAATAAAGAATTATTGGAACACAAGGGTGAAGCGGAGGCAAAGGCAAGGGCTTCCTCTGTACTCAGATGACCCTGATCGTCCGACTATATCAAGCACACCCACGACCCCTATAACTCATCTAGGAACAAACTTCATGAACAATTCTCCCACAAGCAAGTTTGAGTTTCTCCACCACCAAAGTTATCTTCATTCTCCATCTCCACATCACCACCACCTGAACCATTCTCCTTTAACATCACCACTTCACAGAGCTCCGTCTTATTCCCCTCACACATTCTTGGATGCTACTACGCATTCCCCTTTATCCTCGTCATCACTTCACTCACCACTCTCCACTCCCATTTCATCTTCACCTCTCTCCTTCACCTTCCATAGACCTGCACCGTTGTTGTGCAACCCTCTTCGCTTTAAGCGTTACCGTTCAACTTCAACTGTGAATCCAACCACACCAACCACGCCAACCCACTTATCTGATCTTGATAACGGGTTTAGATTTCCAGTTCATCTCAACTCTTCTTCTTCTTTCTCCCACTTCTTTCAGAACCCATCCTTGTTGGATCCTGAAAGAAACATGGTATGTTCGACTTCTCCTTCTAGTTTCCTAAGCAAGATAGAGCTCCCTTCAAACCAATTTTCATTGTCATCGCAACCGCACCAAATAGAGCCATCAGAGTTTAAACTTGATGATGTTGAGTATAATAATGACCCTAACTGTTTAAATACAAGTAATGGGTTGGTTGGGGATATTCTATCTGAAGCTCAAACCATGGCTTCTAGCCATCAGAATTTAAAAAAGCGAAGCTACTTCGGCTTGAATGAAGGGCACGATGAAGTTTTTGAGGGTTGCCAAAGCTTTGATGACTCTCTTTATTGGTCTTCTAGTTCAGGTTGA 1299 0.4426 MMENINKDAENDANSFTAMRGSMEAGDGCCGDSGGATAAGDEVALKKGPWTAAEDAILVDYVTKHGEGNWNAVQRNTKLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLIIELHAQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDPDRPTISSTPTTPITHLGTNFMNNSPTSKFEFLHHQSYLHSPSPHHHHLNHSPLTSPLHRAPSYSPHTFLDATTHSPLSSSSLHSPLSTPISSSPLSFTFHRPAPLLCNPLRFKRYRSTSTVNPTTPTTPTHLSDLDNGFRFPVHLNSSSSFSHFFQNPSLLDPERNMVCSTSPSSFLSKIELPSNQFSLSSQPHQIEPSEFKLDDVEYNNDPNCLNTSNGLVGDILSEAQTMASSHQNLKKRSYFGLNEGHDEVFEGCQSFDDSLYWSSSSG* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0704 432 MobiDBLite consensus disorder prediction 151 176 - -
Ahy11g0704 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Ahy11g0704 432 ProSiteProfiles Myb-like domain profile. 42 94 IPR001005 -
Ahy11g0704 432 Pfam Myb-like DNA-binding domain 100 143 IPR001005 -
Ahy11g0704 432 Pfam Myb-like DNA-binding domain 47 94 IPR001005 -
Ahy11g0704 432 Gene3D - 102 148 - -
Ahy11g0704 432 SUPERFAMILY Homeodomain-like 45 141 IPR009057 -
Ahy11g0704 432 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Ahy11g0704 432 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 32 404 - -
Ahy11g0704 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 94 IPR017930 -
Ahy11g0704 432 MobiDBLite consensus disorder prediction 161 176 - -
Ahy11g0704 432 Gene3D - 46 99 - -
Ahy11g0704 432 MobiDBLite consensus disorder prediction 200 219 - -
Ahy11g0704 432 SMART sant 99 147 IPR001005 -
Ahy11g0704 432 SMART sant 46 96 IPR001005 -
Ahy11g0704 432 CDD SANT 49 94 IPR001005 -
Ahy11g0704 432 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 32 404 - -
Ahy11g0704 432 CDD SANT 102 143 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0704 Ahy-Chr11 11921953 11923882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0704 33 156 MYB Transcription Factor Family AT3G11440 77.419 1.38e-66 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy11g0704 Myb_DNA-binding 2.90E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0704 - K09422 ahf:112720267 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0704 11 11921953 11923882 Ahy11g0704 11 11921953 11923882 ECH