Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0666 ATGGGTAGCGAAGAAGAGAAGGTTCTAGAGAAACAACTTGAGCATCAATTGCAAGAGCAAAGGGATTCTCTCTCTGCTATCGACGACGCTCTTCTCGCTGATCCATCCAACACCGAGCTTCTCGCGGTTCATGGGGAGCTTGTTCAGGCAATTAAGGATGCAGAGGAAGGACTTCTTCACCTAAAACGGGCAAGATTATTACAGGAAGCAGATTTGGTGTTGCACAGCACTAATCTTTTTGCTGAAGAAGAGAAAGTAGAGGCTCTTGACCCCACAGATGAACCAGAGCCACTGGAGGAAAGTTGTTATTCTGTTGGATCTAAATGCAGATTCCGTCACAAAGATGGGAGATGGTACAATGGTCAAGTGGTACAGTTGGATAAGTCAGCAGCGAAACTTTCATTCCTTACTCCTACATCTGAGAACATGCTGATCTGCAAGTTCTTTTTACAACAACGATGTCGATTTGGTACTAACTGTCGCCTGTCACATGGAGTTGATGTTCAATTGTCCTCACTGAAGAAATATGTCCCAACAATATGGAAGCCATCCTTGGTGGGGTCGAGTATATGGGCAGTCTCAAATGCTCATGCGGGCATTTGGAAGCGAGCTGAGCTCGAGTCTTGGGACGAGGATGTCGGAGCTGGACAAGTTGTTTTCCGAGATGATGGAAGTTCAGCAAAGCTTGGGGCTGAAGAAATGGTATTGTCTGAGTATGCGGAAGTGAGTGACACAGAGAGTGATTCCAGCTTAGAAAACTCCGACTCTAGTGACTATGAGGAAGAGGAATCACAAGGTTTAGGATTTCTTGAGAGCACCAACCTACAAAGGGGTGTTCAGACCGAAACTGCTATATTTGCCAAGTGGGAGAACCACACTAGAGGCGTAGCATCGAAAATGATGGCTAATATGGGTTACCGAGAAGGAATGGGTTTAGGCATAACTGGTCAGGGGATGCTAGATCCCATAACAGTGAAAGTCCTACCGGCAAAGCAATCGTTAGATCATGCACTTGAGTCTCAAAAAGGAGAAGAGGATACAGAGAAACAAAGCAAGAAACGGAGCCGTGGTGGTAAAAGAAAGCGCGATAAGAAATTAATGGAAGCAATTCGAGCAGCAAAAGAAGACGACGAATCGAATGTAGACGTCTTTACACTAATAAATAATCAACTGGCAGTGCACGGCCAAGCTTTAAATGGTGGATCAGGGAAAAAGCAGAGCAAAGATTCCGCAGAAGGTAAAAAGGTGGATAGGCGAACGTTGATTGCGTATGAGGATGAGGTGAAGGATTTGAAGTTGAGGGTTGAGAAGCTGGAAGCAATAGTGAATATCAACAGAAAAGAGAAGGCTGTTTATGAGGCTGCTATGAGAAAATTAGCAGAGACACGCAAGGCATTAGCCGAAGCTGAAGCCACGCATGCCTCTGCATCGAATGCAGTTGTTAGCAAAGAAAAAGAGAAGAGATGGCTTAAGTTTTAG 1479 0.4503 MGSEEEKVLEKQLEHQLQEQRDSLSAIDDALLADPSNTELLAVHGELVQAIKDAEEGLLHLKRARLLQEADLVLHSTNLFAEEEKVEALDPTDEPEPLEESCYSVGSKCRFRHKDGRWYNGQVVQLDKSAAKLSFLTPTSENMLICKFFLQQRCRFGTNCRLSHGVDVQLSSLKKYVPTIWKPSLVGSSIWAVSNAHAGIWKRAELESWDEDVGAGQVVFRDDGSSAKLGAEEMVLSEYAEVSDTESDSSLENSDSSDYEEEESQGLGFLESTNLQRGVQTETAIFAKWENHTRGVASKMMANMGYREGMGLGITGQGMLDPITVKVLPAKQSLDHALESQKGEEDTEKQSKKRSRGGKRKRDKKLMEAIRAAKEDDESNVDVFTLINNQLAVHGQALNGGSGKKQSKDSAEGKKVDRRTLIAYEDEVKDLKLRVEKLEAIVNINRKEKAVYEAAMRKLAETRKALAEAEATHASASNAVVSKEKEKRWLKF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0666 492 MobiDBLite consensus disorder prediction 337 365 - -
Ahy11g0666 492 Gene3D - 117 177 - -
Ahy11g0666 492 SUPERFAMILY CCCH zinc finger 141 165 IPR036855 GO:0046872
Ahy11g0666 492 MobiDBLite consensus disorder prediction 337 353 - -
Ahy11g0666 492 SMART c3hfinal6 140 166 IPR000571 GO:0046872
Ahy11g0666 492 Pfam G-patch domain 293 335 IPR000467 GO:0003676
Ahy11g0666 492 ProSiteProfiles Zinc finger C3H1-type profile. 140 167 IPR000571 GO:0046872
Ahy11g0666 492 Pfam CCCH-type zinc finger 145 165 IPR041367 -
Ahy11g0666 492 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 492 - -
Ahy11g0666 492 ProSiteProfiles G-patch domain profile. 293 339 IPR000467 GO:0003676
Ahy11g0666 492 Coils Coil 421 448 - -
Ahy11g0666 492 MobiDBLite consensus disorder prediction 251 265 - -
Ahy11g0666 492 Coils Coil 452 486 - -
Ahy11g0666 492 SMART G-patch_5 291 337 IPR000467 GO:0003676
Ahy11g0666 492 MobiDBLite consensus disorder prediction 240 273 - -
Ahy11g0666 492 MobiDBLite consensus disorder prediction 471 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0666 Ahy-Chr11 11019842 11025225 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy11g0666 G-patch 2.10E-11 CL0449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0666 - - gmx:100796284 724.546