Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0648 ATGGCATCGTCATCAGACTCATGGATGAAGGAATATAATGAAGCAGTGAAACTCGCCGATGATATCAATGGCATGATTTCTGAGCGGAGTTCATTATCAACATCTGGACCAGAAGCTCAGCGTCATGCATCTGCTATAAGAAGGAAGATTACTATCTTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTATCTAAAGTCCCTGGAAAATCTGAGAAGGAGATGAATCGCCGCAGGGAAACACTTACAAATTTGAGGTCAAAAGTTAACCAAATGGCTTCAACACTGAACATGTCAAACTTTGCAAATAGGGATAGTTTATTTGGTCCTGAAATAAAACCAGATGCAATGAGCAGAACTGTTGGCCTGGATAACAGTGGACTCGTTGGACTTCAAAGGCAAATTATGAAAGAGCAAGATGAAGGCCTTGAAAAATTGGAGGAGACTGTTGTAAGTACAAAGCACATTGCATTAGCAGTGAATGAAGAGCTGAGTCTACACACTAGACTAATTGATGACTTGGACGAACATGTAGATGTTACAGATTCTCGTCTAAGGCGTGTCCAGAAGAACTTGGCAGTTTTAAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTAGCAGTGGTTGGGATAGTGGTTTTGGTGGTTGTGATATGGTTGTTGGTCAAATATTTGTAG 690 0.4145 MASSSDSWMKEYNEAVKLADDINGMISERSSLSTSGPEAQRHASAIRRKITILGTRLDSLQSLLSKVPGKSEKEMNRRRETLTNLRSKVNQMASTLNMSNFANRDSLFGPEIKPDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVVSTKHIALAVNEELSLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLAVVGIVVLVVVIWLLVKYL* 230
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0648 229 Pfam SNARE domain 170 221 IPR000727 -
Ahy11g0648 229 Gene3D - 135 197 - -
Ahy11g0648 229 CDD SNARE_Qc 136 193 - -
Ahy11g0648 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Ahy11g0648 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 223 - -
Ahy11g0648 229 SMART tSNARE_6 128 195 IPR000727 -
Ahy11g0648 229 SUPERFAMILY SNARE fusion complex 124 194 - -
Ahy11g0648 229 PANTHER SYNTAXIN 1 223 IPR045242 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy11g0648 Ahy-Chr11 10681634 10685931 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0648 1 229 SNARE and Associated Proteins AT1G16240 73.276 4.80e-125 352
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0648 K08503 - gmx:100794038 376.711