Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0576 ATGGATCCTCGACCAATTACACGATGTGGGTGTGGTGCACAAATAAAGGTTCACGTTGATCAAAGCACTGGCCGTTGGTTCGTAGATAAGTTTTGTGGTGAACATAACCATGAGATGCTAGATGCAAGGTTTCGGGGGTTGTTGCGTTCTCATAGGGTAATCAAGGAAGGGGACATGCATCAAATTAACTCGATGAGAAAAGCTGAGATGCGTGTGCCAACCATATTTCGTGCATTTGTCACCCAATGCGGGGGATTTGAGACAGTTGGATTTGAAATTAAAGACATCTACAATGCAATAGAGAATGAAAGAAGAGTGGGGGCAAGTGATGCGGAGTGTGCCTTAAAGTATTTGTGTTGCCTAAAGAGGAATGACGCAAACATGTTTTGGAAATTCTCATTGGACGAGGAGAGGAGGCTGCACAATATATTTTGGTGTGATGGTACTAGCCGACATGACTATAGTGTGTTTGGGGATGTTCTGGGGTTCGACGCAACTTATGGGAGGAATAGGTACAAGTGTCTGCTTGTAATATTTTTGGGTTTGGATCATCACATGCAGACTGTGGTATTCAGTTGTGCAATTCTGAGCAACGAAGTAGAGGAAAGTTATGTCTGGTTGTTGCGAGTATTTCTTGAGGCAATGAAAGGACAAGAACCGAAATCTATGTTGACCGATGGAGATTTGGCAATGAAGAATGCAATTAATGCTGTCTTTCCAAATGCACATCACAGGCTGTGCAGTTGGCACCTGCTACGAAATGCGACTGCCCGCATTGGCCGGCCCATGTTTCTTTGCAAGTTCCGAGTTTGCCTGATGGGTGACTTAGAGGTAGATGAGTTTGAGAACCTATGGAGCGATGTTGTGGAAGAGTTTGGGTTGCAACAAAACCTGTGGATACTAGATATGTATGAACGCAAGCATATGTGGGCTAATGCGTATATTAGAGGCAAATTTTTTGCTGGGCTGAAGACGATGTCTCGATATGAGGCATTGAACATGCAAATTGGGAAATTTATTGGGAACGGATACAATCTACGTGAATTTATTGAGCATTTTCAGCACTATCTCAAGTTCATGAGAAGAAGAGAGCTAGTCGCCGATTATAGATCTGTGTATGGGCAACCCATTGTTAAGTCGAAGTTGGAGGCCTTGGAAAGCTACGCAGCAACAGTATACACCAAAGAGGTTTTTGAACTATTCCGGGAGGTCCTCCTTTTGTCCAGCAATGTAAGAGTTGTATCTTGCAAGAAAACTAGCACGTGTTCCCTGTTTGAGGTTACCATGTACTGCCGGGACCAGTCCTGGAGTGTGGCTTGGGACGAGGCGGATGACGAATTTACTTGCTCATGTTTGCGTATGGAATCATTTGGCATTCCTTGTGTGCACATGGTGGGGGTGTTTCTTTATCTGAACATCACTCAGCTTCCGGTGAAGACCATATGCGAACGATGA 1455 0.444 MDPRPITRCGCGAQIKVHVDQSTGRWFVDKFCGEHNHEMLDARFRGLLRSHRVIKEGDMHQINSMRKAEMRVPTIFRAFVTQCGGFETVGFEIKDIYNAIENERRVGASDAECALKYLCCLKRNDANMFWKFSLDEERRLHNIFWCDGTSRHDYSVFGDVLGFDATYGRNRYKCLLVIFLGLDHHMQTVVFSCAILSNEVEESYVWLLRVFLEAMKGQEPKSMLTDGDLAMKNAINAVFPNAHHRLCSWHLLRNATARIGRPMFLCKFRVCLMGDLEVDEFENLWSDVVEEFGLQQNLWILDMYERKHMWANAYIRGKFFAGLKTMSRYEALNMQIGKFIGNGYNLREFIEHFQHYLKFMRRRELVADYRSVYGQPIVKSKLEALESYAATVYTKEVFELFREVLLLSSNVRVVSCKKTSTCSLFEVTMYCRDQSWSVAWDEADDEFTCSCLRMESFGIPCVHMVGVFLYLNITQLPVKTICER* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0576 484 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 468 IPR031052 GO:0006355
Ahy11g0576 484 SMART 26again6 447 474 IPR006564 GO:0008270
Ahy11g0576 484 ProSiteProfiles Zinc finger SWIM-type profile. 436 472 IPR007527 GO:0008270
Ahy11g0576 484 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Ahy11g0576 484 PANTHER OS02G0262500 PROTEIN 2 468 - -
Ahy11g0576 484 Pfam SWIM zinc finger 448 472 IPR007527 GO:0008270
Ahy11g0576 484 Pfam MULE transposase domain 160 254 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0576 Ahy-Chr11 9031393 9032847 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g0576 MULE 1.70E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0576 - - adu:107488338 747.273