LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g0569	ATGCAGACCAACTGTGTTGTGGATGGAAAATTTGTCCCAAAGGTGGGAATGATTTTCAAGATACTAGAAGAAATTGGAAAGTTCTACAAACATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGGGACGAAGACAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGAGGTGGAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCAGCCAGAATTTATGTACACATAATGAAGGATGTTGGTCTTTGGATAATTTCCAAAGTTATTTTAAATCACTCACATCCTTGTTGTGCAGACCAGGCTGAGATGCTCAAACAATACAGGGAGCTTAGCATGTTCGTGCATCGCACCATCGAAACCCACGAGGAAGCTGGAATTAGACCGAGTAAAACTTACCAATCATTTGTGGCAGCAGCTGGCAGCCACCGTGAACTAGGTTTGATAGAAAAAGACGTCAGGAATTACATCACAAGGGAAGTACGGAATATTTTCGAAGAAGACGATGCCAAAGAATTTGGGAAAAGTAGGGCTGCATTTGATTATTTCGGAGATGTGGTTTCATTTGACACCACCTATAACACAAACAGGTACAATTTGGTTTTAGGTTCTTTTGTGGGCGTGAATCACCACGGCCAGTCGACACTTCTTGGATGCGCACTGATAAAAAATGAGGACATCCAATCATTCAAATGGCTATTTGAGTGTTGGCTATGTTGCATGGGAGGGAAGGCACCAAAAGGTATTCTTACCGATCAATGCGCATCGATTCAAAGGGCAATTGAGCTATGCATGCCAATAACAATTCACCGCTGGTGTATCTAG	867	0.4164	MQTNCVVDGKFVPKVGMIFKILEEIGKFYKHYSKLAGFSTKIRNTTRDEDKIKNQLIVCSREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWIISKVILNHSHPCCADQAEMLKQYRELSMFVHRTIETHEEAGIRPSKTYQSFVAAAGSHRELGLIEKDVRNYITREVRNIFEEDDAKEFGKSRAAFDYFGDVVSFDTTYNTNRYNLVLGSFVGVNHHGQSTLLGCALIKNEDIQSFKWLFECWLCCMGGKAPKGILTDQCASIQRAIELCMPITIHRWCI*	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy11g0569	288	PANTHER	OS03G0843700 PROTEIN	9	287	-	-
	Ahy11g0569	288	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	9	287	IPR031052	GO:0006355
	Ahy11g0569	288	Pfam	MULE transposase domain	200	288	IPR018289	-
	Ahy11g0569	288	Pfam	FAR1 DNA-binding domain	27	111	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g0569	Ahy-Chr11	8781765	8782814	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Ahy11g0569		MULE	7.40E-25	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g0569	-		-	aip:110271906	438.343