Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0538 ATGAATCAGACATATGTGCCCAAGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGAAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCTAGAACCAACTACAATTGCCCCGCAAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTTGGATTATATCGAAGGTGTGTTTGGATCATTCACATCCTTGTGATCCAGAGATGACAAAACTGTTGACACGTAATAGAGAGATGACTATGCACATGTGTCGAGTCATTGAGAGGAATGATGAAGCAGGTGTGAGACCAAGCAAAACATATCAAGTATTGATGGGTGAAGCGGGGGGTTTCTCTAAGATAAACTTAATGGAAAAAGATGTTAGGAACTATCTCAGCAGAAAGGTACGCAATGTTACGGAAGAAATGGATGCTAGGGAGATGTTGAAGTATTTTACACGGATGAAGGATATGAACTCTGATTTTTATTTTGATATTGAACTTGATCAAAACAAGCGTCTCAAAACTATATTTTGGGCTGATGCTCGAAGTAGAGCAGCATATGAGTACTTTGGAGATGCAGTTTCATTTGATACTACTTATAAAACCAATCGTTACGATATGCCATTTGGTTCCTTTGTGGGGGTTAATCACCATGGTAACTCAATGCTTCTTGGGTGTGGTTTGTTGACAAAGGAAAATCCAGGCTCGTTTACTTGGTTATTTAATGCTTGGCTTACATGTATGCATGGAAAGGCTCCTAAAGGCATTATAACAGACCAATGCCTCGGAATACGAGCTGGAATTGAGAATGTGATGCCAGAGACACGTCATAGGTTATGCATTTGGCACATTACAAAAAAGATTCTAGAAAAATTCAAAAGACACAAGAGATATGAAGAGTTACAAAGTGATTTAAATAATATTGTTTGGGAGTCTATTTCAGAAGATGATTTTCAAAATCAATGGGAAGATTTTCTGATTGAATATGATCCAGAAGATAACAAGTGGCTATCAGATATCTATGAAGAAAGACATCGATGGGTTCCAATTTTTCTTGACAACTTTTTTTGGGCTGAGCAACAAGAAAGGGAGGCTGATGTTGAAGACTATAAATCAATAATACCTTATGCCACTAATTCCTTAATAGAGAAGCAATTTCAAGGTGCCTATACTAATGCAAAGTTTAAGGAAGTACAAAAGCAATTTAGAAAGAAAGCAAATTGTATTTTGCACCTTATGAAAGCAGTTTCTACATCTAAAGTCTATTCTATTTTGGAGGATGTATCTACTTCTAAAGAGAGGGTTTATGAAGTTAACTACAATGCAGAAACGAAGGACATTACATGCATGTGTCAAATGTTTGAATCAAGAGGCATATTATGCCGTCATAGCTTGGTTGTCCTAGGGCATGAACGCATGAGAGAAATTCCAAGAAGATACATTTTGGACCGTTGGAGCAAACTTGTGAAGCGAAGACATAGTGATATTAAGAGCAGCCATGATCCAATGTCAAAAGCACATGTTGCTAACTCATCATCTAATGCCAATGAGTTAGATAATTTGCTTACATTAGAAGATGGTGGTAAAGATGGTGGTAAAGATGTATTGTCCATTTTTGTAGGAGGCTGTATAATAAGCATTCAAGATATTAAAAGCCCTCCTTATGTTTCCACTAAGGGTCGTCCAACAAATAGGCTAAGATCTGAAAAAGACAAGATGATAAAAAAGAAGACCGACGCAAAGAAGAGGAAAAGTGAGATAACCGAAAAAGAGGATAATCAACTTATTAGAGATAGTCAAAGTCTCTCTTTCAACGAACAGGTTCATCCAATACTTCAAGATGCTAACTACCATGTTAATGAGGGATTTGAATCTGATTCAATGGGAGGATCAATGGGAGGATTCATGTCCTTATTGAACTCAATCCATTCATACCAATTCTCAAATGTCGATTGA 2061 0.3717 MNQTYVPKVGMCFGTIEDANQFYQNYAKRVGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKTNPRTNYNCPARISIRLNKEGLWIISKVCLDHSHPCDPEMTKLLTRNREMTMHMCRVIERNDEAGVRPSKTYQVLMGEAGGFSKINLMEKDVRNYLSRKVRNVTEEMDAREMLKYFTRMKDMNSDFYFDIELDQNKRLKTIFWADARSRAAYEYFGDAVSFDTTYKTNRYDMPFGSFVGVNHHGNSMLLGCGLLTKENPGSFTWLFNAWLTCMHGKAPKGIITDQCLGIRAGIENVMPETRHRLCIWHITKKILEKFKRHKRYEELQSDLNNIVWESISEDDFQNQWEDFLIEYDPEDNKWLSDIYEERHRWVPIFLDNFFWAEQQEREADVEDYKSIIPYATNSLIEKQFQGAYTNAKFKEVQKQFRKKANCILHLMKAVSTSKVYSILEDVSTSKERVYEVNYNAETKDITCMCQMFESRGILCRHSLVVLGHERMREIPRRYILDRWSKLVKRRHSDIKSSHDPMSKAHVANSSSNANELDNLLTLEDGGKDGGKDVLSIFVGGCIISIQDIKSPPYVSTKGRPTNRLRSEKDKMIKKKTDAKKRKSEITEKEDNQLIRDSQSLSFNEQVHPILQDANYHVNEGFESDSMGGSMGGFMSLLNSIHSYQFSNVD* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0538 686 Pfam MULE transposase domain 229 322 IPR018289 -
Ahy11g0538 686 ProSiteProfiles Zinc finger SWIM-type profile. 471 507 IPR007527 GO:0008270
Ahy11g0538 686 PANTHER OS03G0843700 PROTEIN 4 398 - -
Ahy11g0538 686 PANTHER OS03G0843700 PROTEIN 396 544 - -
Ahy11g0538 686 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Ahy11g0538 686 SMART 26again6 482 509 IPR006564 GO:0008270
Ahy11g0538 686 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 396 544 IPR031052 GO:0006355
Ahy11g0538 686 ProSitePatterns Transposases, Mutator family, signature. 294 318 IPR001207 GO:0003677|GO:0004803|GO:0006313
Ahy11g0538 686 MobiDBLite consensus disorder prediction 607 627 - -
Ahy11g0538 686 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 398 IPR031052 GO:0006355
Ahy11g0538 686 Pfam SWIM zinc finger 471 504 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0538 Ahy-Chr11 8253267 8256196 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g0538 MULE 2.60E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0538 - - ahf:112717726 1259.59