Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0537 ATGTCAATGATGGAATCAGTGTTAGAAGAACAGAATATTGAAGATGTGCCCAAGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCATAATTATGCCAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAATATAAGGTTCCTGAGAATCAAATGATCACTTGCAATAAGGAGGGGAAACACAAATCTAGAGTTTCACCAATAGAAAAGACCAACCCTAGAACCAACTACAATTGCCCCGCAAGGATTTCTATTAGGTTTAATAAGGAGGGTCTTTGGATTATATCGAAGGTGTGTTTGGATCATTCACATCCTTGTGATCCAGAGATGGCAAAACTGTTGACACGTAATAGAGAGATGACTATACACATGTGTCGAGTCATTGAGAGGAATGATGAAGCAGCATTCAAATGA 444 0.3829 MSMMESVLEEQNIEDVPKVGMCFGTIEDANQFYHNYAKRVGFVTKIRFTRRVGKYKVPENQMITCNKEGKHKSRVSPIEKTNPRTNYNCPARISIRFNKEGLWIISKVCLDHSHPCDPEMAKLLTRNREMTIHMCRVIERNDEAAFK* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0537 147 Pfam FAR1 DNA-binding domain 31 117 IPR004330 -
Ahy11g0537 147 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0537 Ahy-Chr11 8243239 8245182 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g0537 FAR1 1.40E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0537 - K17604 aip:107645533 309.301