Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0460 ATGGATAAGGTTGGCTGTGAGAAGCTTGCTAAAATCTATGATGTTAAGGACCCCAACACTGCGTTCGTGTTCAAGTTTCGCACCCATTTCGTAGGGAGCAAATCCACTGGTTTTGCTTTGATTTATGATACTGTTGAGAATGCTAAGAAGTATGAGCCTAAGTACAGATTTGTTAGGCCATCAATACTTCCAATCCAGATCCTCCGAATTGGGCAGTTTGTGATTCTGTGTGTACCAGGAGAGTTCTCAACAATGGCTGGGAGGCGTCTTCGCGATTCGGTTAAGACAGTGCTAAGTAATGACAAGGACTTTAAAAACATGCATGTTGTTGTAGCAGGGTTGACTAATACTTATTCGCAGTATGTAACAACATATGAAGAGTACCAAGTGCAAAGATACGAGGGTGCTTCCACACTATATGGTCCGCACACACTGAGCGCATACATTCAGGAGTTCAAGAAGCTTGCAAAGGCCCTCATCAGCAGCGAACCGGTAGAACCCGGTCCACAACCCCCTGATCTCCTGGATAAGCAAATAAGCTTCCTCCCACCAGTTGTGGTAGATGGAACCCCACACGGAGTAGACTTCGGAGATGTGTGCTCTGATGTGCCTCAGAACTCCACCTTCAAATGTGGTGACATGGTGACAGCATCATTCTGGTCAGCCTGCCCAAGGAACGACCTCATGACCGAAGGCACCTTTGCATTGGTGGAATTTCATAAAGGTGAAGATAATTGGGTCCCTGTCTATGATGATGACGATTTTTGCTTGCGCTTTAAGTGGTCGAGGCCTTCCAAACTCAGTTCTAGGAGTAAAGCAACCATAGAATGGAGGATACCAGATGATGTGAATCCTGGTGTGTATAGAATAAGACATTTTGGTGCTGCAAAGAGTTTATTTGGTTCAATTCACCACTTTACAGGTTCATCAAGTGCGTTTGTGGTAGCATAG 951 0.4522 MDKVGCEKLAKIYDVKDPNTAFVFKFRTHFVGSKSTGFALIYDTVENAKKYEPKYRFVRPSILPIQILRIGQFVILCVPGEFSTMAGRRLRDSVKTVLSNDKDFKNMHVVVAGLTNTYSQYVTTYEEYQVQRYEGASTLYGPHTLSAYIQEFKKLAKALISSEPVEPGPQPPDLLDKQISFLPPVVVDGTPHGVDFGDVCSDVPQNSTFKCGDMVTASFWSACPRNDLMTEGTFALVEFHKGEDNWVPVYDDDDFCLRFKWSRPSKLSSRSKATIEWRIPDDVNPGVYRIRHFGAAKSLFGSIHHFTGSSSAFVVA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0460 316 PANTHER CERAMIDASE 41 316 IPR006823 GO:0017040|GO:0046514
Ahy11g0460 316 Pfam Neutral/alkaline non-lysosomal ceramidase, C-terminal 152 315 IPR031331 -
Ahy11g0460 316 Gene3D - 183 316 IPR038445 -
Ahy11g0460 316 Gene3D - 4 119 - -
Ahy11g0460 316 PANTHER NEUTRAL CERAMIDASE 41 316 - -
Ahy11g0460 316 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 7 61 IPR012678 GO:0003735|GO:0005840|GO:0006412
Ahy11g0460 316 Pfam Ribosomal protein S24e 7 59 IPR001976 GO:0003735|GO:0005840|GO:0006412
Ahy11g0460 316 Pfam Neutral/alkaline non-lysosomal ceramidase, N-terminal 59 150 IPR031329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0460 Ahy-Chr11 6460469 6468622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0460 7 62 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 69.643 4.77e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0460 K12349 - aip:107610891 483.411