Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0426 ATGAAGTGGGAAGTAGAAGTACTCTCTCCTTCTTCACCTTATGTTCATCATAACAACACAACTCATTGGTTTCTTGGAGATAACAACATCATCAACAACAACAACAACAACAATAATAGGAGCAGCACAAAATGGACCCATGAAGAGAACAAATTGTTTGAGAATGCTCTTGCTTTGCATGATAAGGATACACCAGATAGGTGGCACAGGGTAGCTGAGATGATTCCAGGGAAAACTGTTCTTGATGTGATGAAGCAGTACCATGAATTGTTAGCAGATGTTAGTGATATTGAAAATGGGTTGGTACCAATTCCAGGTTACAGTACCAGCACAACAACAACTACTTCACCTTTTACATTGGATTGGGTCAACAATAATTGTTCTGGGTATGATGGGTTTAAAGGAATTGGTGCTGCTGCAAAGAGATCTTCAAAAACACCAGAACAAGAGAGGAAGAAAGGTGTGCCTTGGACTGAAGAAGAGCATAAATTGTTCCTACTTGGTCTAAAGAAGTATGGCAAAGGCGATTGGAGGAACATTTCGCGCAACTTCGTGATCACTCGGACGCCAACTCAGGTGGCGAGCCATGCTCAGAAGTACTTCATCCGACAACTCTCCGGCGGCAAAGACAAGAGGAGGGCAAGCATCCATGACATAACAACAGTTAATCTCACAGACAACAACAACAGAACACTTGCTAATCCTTCCTCAGAAGATAGCAGCAAGAGATCCACTTCACCACAACACCATCATTCCATGGTGTTCTCAAATTCAAATCCTATAGGGAAATTCCAATGGAACAATAATATTAATAATGATAATGATGATACTAAGTCAAATTCAGGAGGAGGAGTATCTACTATGAGATTCAACAATGATGATGAAGCTTTTATGTCTCATCATTATGGTGTTAATTCCTCCTATGGTTTTAAGATGCAGGGTCAGAATATGCATAAAAGTGCTCTTAATCAGTCTTCTTACTTAGCACTTCAGACACAAAACATTGCTTTCCAAATGTAG 1020 0.401 MKWEVEVLSPSSPYVHHNNTTHWFLGDNNIINNNNNNNNRSSTKWTHEENKLFENALALHDKDTPDRWHRVAEMIPGKTVLDVMKQYHELLADVSDIENGLVPIPGYSTSTTTTTSPFTLDWVNNNCSGYDGFKGIGAAAKRSSKTPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTDNNNRTLANPSSEDSSKRSTSPQHHHSMVFSNSNPIGKFQWNNNINNDNDDTKSNSGGGVSTMRFNNDDEAFMSHHYGVNSSYGFKMQGQNMHKSALNQSSYLALQTQNIAFQM* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0426 339 ProSiteProfiles Myb-like domain profile. 37 91 IPR001005 -
Ahy11g0426 339 ProSiteProfiles Myb-like domain profile. 149 201 IPR001005 -
Ahy11g0426 339 SUPERFAMILY Homeodomain-like 150 204 IPR009057 -
Ahy11g0426 339 Pfam Myb-like DNA-binding domain 156 201 IPR001005 -
Ahy11g0426 339 Pfam Myb-like DNA-binding domain 44 91 IPR001005 -
Ahy11g0426 339 Gene3D - 36 104 - -
Ahy11g0426 339 SUPERFAMILY Homeodomain-like 43 99 IPR009057 -
Ahy11g0426 339 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 152 204 IPR006447 GO:0003677
Ahy11g0426 339 Gene3D - 155 205 - -
Ahy11g0426 339 ProSiteProfiles SANT domain profile. 40 87 IPR017884 -
Ahy11g0426 339 ProSiteProfiles SANT domain profile. 157 205 IPR017884 -
Ahy11g0426 339 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 319 - -
Ahy11g0426 339 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 319 IPR043363 -
Ahy11g0426 339 SMART sant 153 203 IPR001005 -
Ahy11g0426 339 SMART sant 41 93 IPR001005 -
Ahy11g0426 339 MobiDBLite consensus disorder prediction 218 287 - -
Ahy11g0426 339 CDD SANT 156 201 IPR001005 -
Ahy11g0426 339 MobiDBLite consensus disorder prediction 212 287 - -
Ahy11g0426 339 CDD SANT 44 91 IPR001005 -
Ahy11g0426 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 205 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0426 Ahy-Chr11 5816066 5818688 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy11g0426 Myb_DNA-binding 1.80E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0426 - - cam:101514273 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0426 11 5816066 5818688 Ahy11g0426 11 5816066 5818688 ECH
Ahy11g0426 11 5816066 5818688 Ahy17g0990 17 12468825 12470694 ECH
Ahy17g1518 17 30195923 30198725 Ahy11g0426 11 5816066 5818688 ECH
Ahy12g1983 12 102431997 102435249 Ahy11g0426 11 5816066 5818688 ECH