Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0416 ATGAATGGTAATAGTAGTAGTAATAGTGTTCCATTTCTTCATCATGAGTATGGTGGTAATTCTATGTGTCGGTTAGGGCTTCCTTTAACAGCCATAGATAGGTTCTTATGTAGCCAACAACAAAGTCAAGTCCTTCACAATGATGATAGTGTTTTTGATGAAGATTTTCAAACTAGGTTTTCTAATTGTTATTATGGTGGTGGTGGTTCAAATAACTCTTATTATAAGCTTGTGTGGCCTAATTGCACTACTCATCAAGAAGCAAGCATTGTTGTTCATGATAATAATCAACAAGAGGGTTTCAATAATTGGCTACAACAAATTCCCACATTGTGTCACAATCAAGAAGATGTTCATCAAGCTTTAGGGAAAACTAATAATGTCAAAGTTGTGGGAAGAAACCCTAAAAAAGCTTCTTCTTCTTCTGTATCCTTCATCAAAGGACAATGGACTCCTGAAGAAGACAGGAAATTGGAGAAGCTGGTGAAACAACATGGAACAAGGAAGTGGTCACAAATAGCTGAAAAATTGGAGGGAAGGGCTGGGAAGCAATGTAGAGAGAGGTGGCATAATCATCTCCGACCAGATATTAAGAAAGACGGTTGGAGTGAAGAAGAAGAAAGGATATTGGTGGAAACTCATGCCAAGGTTGGAAATCGTTGGGCAGAAATCGCGAAGCATATACCAGGGCGAACTGAAAACTCGATCAAGAACCATTGGAACGCAACAAAGAGAAGGCAGAACTCAAGGAGAAAGAACAAGAAGCCATCATCATCATCAACCAACTCAAACAATAATGGCAAACCACAATCTTCAATTCTCCAAGACTACATTAGAAGCCAAACCCTAATTGGTACCAATAATATCAATGCTCCTATTACCACTACTAATTCAACCCCAACTATTACTAGTGAATCTGAATCTACCACTAATATTAGTGATAATAATAATCCATATTATTCATCACCAACAATCATAGCTGAATCATATGATGATGAGTTGCTCTTCATGCAACAACTTTTCAAAGAGAATAATCAAAATGTCAATGGAGATGGTATTGGTAAGAACCCTAGTGATGAATGTGGTGATGGGTTTGTTCATTATTCCAATAATTATTATTATCTTTCAAATCCATGGAACATGCACAACCCTATCACCAATAATAATAATAATAATGGTTACCTTGATTCTGATCTCTATATCTCTCAATTGATGAACAATGGAGGTGCAACAACAAGTTCATCATCATCACTTTTCAATGATCATGGGGCTTATGAGAAGAATCAAAACATGGATTTTCATTGTTCAGCAGCTGTGAAGAAAAGGGAGATTGATCTTTTAGAGTTTGTTTCCACTCATCATCAATTTTAA 1371 0.3647 MNGNSSSNSVPFLHHEYGGNSMCRLGLPLTAIDRFLCSQQQSQVLHNDDSVFDEDFQTRFSNCYYGGGGSNNSYYKLVWPNCTTHQEASIVVHDNNQQEGFNNWLQQIPTLCHNQEDVHQALGKTNNVKVVGRNPKKASSSSVSFIKGQWTPEEDRKLEKLVKQHGTRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDGWSEEEERILVETHAKVGNRWAEIAKHIPGRTENSIKNHWNATKRRQNSRRKNKKPSSSSTNSNNNGKPQSSILQDYIRSQTLIGTNNINAPITTTNSTPTITSESESTTNISDNNNPYYSSPTIIAESYDDELLFMQQLFKENNQNVNGDGIGKNPSDECGDGFVHYSNNYYYLSNPWNMHNPITNNNNNNGYLDSDLYISQLMNNGGATTSSSSSLFNDHGAYEKNQNMDFHCSAAVKKREIDLLEFVSTHHQF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0416 456 ProSiteProfiles Myb-like domain profile. 194 244 IPR001005 -
Ahy11g0416 456 Gene3D - 146 198 - -
Ahy11g0416 456 CDD SANT 150 193 IPR001005 -
Ahy11g0416 456 Pfam Myb-like DNA-binding domain 150 207 - -
Ahy11g0416 456 Gene3D - 201 272 - -
Ahy11g0416 456 SMART sant 198 246 IPR001005 -
Ahy11g0416 456 SMART sant 146 195 IPR001005 -
Ahy11g0416 456 PANTHER MYB PROTEIN-RELATED 121 392 - -
Ahy11g0416 456 MobiDBLite consensus disorder prediction 289 316 - -
Ahy11g0416 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 248 IPR017930 -
Ahy11g0416 456 PANTHER TRANSCRIPTION FACTOR MYB119-RELATED 121 392 - -
Ahy11g0416 456 CDD SANT 202 244 IPR001005 -
Ahy11g0416 456 ProSiteProfiles Myb-like domain profile. 147 193 IPR001005 -
Ahy11g0416 456 ProSiteProfiles SANT domain profile. 197 248 IPR017884 -
Ahy11g0416 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 142 197 IPR017930 -
Ahy11g0416 456 SUPERFAMILY Homeodomain-like 144 240 IPR009057 -
Ahy11g0416 456 MobiDBLite consensus disorder prediction 254 271 - -
Ahy11g0416 456 MobiDBLite consensus disorder prediction 228 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0416 Ahy-Chr11 5592148 5594715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0416 141 451 MYB Transcription Factor Family AT5G58850 45.509 6.88e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy11g0416 Myb_DNA-bind_6 3.60E-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0416 K09422 - gmx:100786295 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0416 11 5592148 5594715 Ahy11g0416 11 5592148 5594715 ECH