Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0338 ATGGGGGGTTCCTCACCTTGTGCTTCTTGCAAATTGTTGAGGCGGCGTTGCACCAAAGAATGCATCTTTGCTCCTTATTTTCCTTCTGATGATCCTCGCAAGTTTGCCATTGTGCACAAAGTCTTTGGCGCTAGCAATGTCAGCAAAATGCTTCAGGAACTTCCAATTGATCAAAGAGGAGATGCTGTAAGCAGTTTAGTTTATGAGGCAACTGCAAGGGTGAGAGACCCTGTGTATGGTTGTGTTGGAGCAATATCATACCTTCAAAATCAAGTTACACAATTGCAAATGCAACTTGCAGTGGCTCAGGCAGAGATTCTAAGCATCCATCAGATGCAACAAGACCCTTCTAATAACAATACTACCTTATTACCAAGTCAATTATTAGATCAAGATTATAGTGAAAAGTTTCTGCTCCTATCATCAGCTGAAAACAATAACAACTATGACTTTCTTCCCCAATATCTTAGCTTCGCTTCTTCTTCTTCTTCTTCTTCAAATGTATTCCAAGACTCTGAGCCTCTTAAGAGAGAGTCTTTTTGTTAA 546 0.4029 MGGSSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPIDQRGDAVSSLVYEATARVRDPVYGCVGAISYLQNQVTQLQMQLAVAQAEILSIHQMQQDPSNNNTTLLPSQLLDQDYSEKFLLLSSAENNNNYDFLPQYLSFASSSSSSSNVFQDSEPLKRESFC* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0338 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 179 - -
Ahy11g0338 181 Coils Coil 85 105 - -
Ahy11g0338 181 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Ahy11g0338 181 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Ahy11g0338 181 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 2 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0338 Ahy-Chr11 3892084 3893281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0338 3 140 AS2 family AT2G30130 76.812 5.52e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy11g0338 LOB 8.30E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0338 - - aip:107644491 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0338 11 3892084 3893281 Ahy11g0338 11 3892084 3893281 ECH