Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0337 ATGGCAGCAACAAGAAGCATTGGCAATTGTATCCTCCGAAACCACTCCGTCTGTTTCTCCACTGCTTCTTGTTACCGGAAACAGATTTCCCTCGCCAGTCTCTTCCAAAGGTATGGTTTCCCCCCTTCCCAAATTCCCCACTTCATCTCCAACAACTCCTTTCTCTTAGATTCCAACATACCTGAACTCGAGAAATCACTTGCCACTCTCTTCTCCTTCCGAATTCCCCAAAATGCTGTTGTCTCCCTCATTCGCAATTGCCCTGCCGTGTTGGAACCCAAGTTCCTTCAAAACTGGGAGCAGGGATTGTCGAAGCTCAAGGCCATGAACCCTTCCTCATCCATGATTGTGAACTTCTTGGAGTGTTCTAGAAGATTCCAACTGGACCCGGTTGAGGCTTCCAAGAAAGTCGAGGAATTGAAGGGATTGGGATTTTCTGATGACGTTGTGTGGAAGGTTTTGGAGGGTTTTCCGAGTGTGATTGCAGTGAGCAGGAGGCAACTTGCTTCTGTGATTGAGTTTCTGGTGGAATTTGGGATTCCGAGGGATGAGGTGGTTGATCGAGTTGTGCGGTTGAACCCAAGGGTGTTGGGAATTGGGGTTGAGCAGAGGTTGAAGCCCCTGATTCGTGAATTGGAGGAGTTAAGATTTCCTAGGAATGAAATTAGGACCGAGGTAGTTAGGGTGCCAAGGATTTTGGGAATGGAGATTGGGGAATTTTCACGGTGTTTGCGGTTGCTAGAGGGTTTGAAGTGTAGGGAAGCCATCAAAGAGAGGATTTTTCAGGATGGTTTGCTGAGGGCTTGTTTTGAAGTGAAGTTAAAAGTGGATTGCTTGTGCGATCACGGTTTGATTCGAAGTGATGCTTTGAAGTTGTTATGGAAAGAGCCAAGGTTGATAACCTATGATGTAGAGTCCATTGAGAAAAAGATTGGGTTCTTGGTGCAGAGGATGAATTATAGTGTTGATTGTTTGCTTCATGTTCCTGAGTACTTGAGTGTGAACTTTGAGAAGCAGATTGTTCCTAGGTACAATGTGATGGAGTACTTGAAAGCGAAAGGCGCGCTTGGTTTCGAGGTTGGACTAAAGGACATGGTAAAGCCAACCAGGCTTAGATTTTACAATCTTTATGTCAAGCCCTATCCAGAGTGTGAAAAGATTTATGGGCGGTTTTCTGGAATTACCAAAGTTAAAAGTAAGCATCCACCTGGTCTATGGAAACTCTTTAAACCTCCCAAGTTCCTGACAACCGATGAAGATGCGAAGAATTTGAAGTCATTCATGAACACACTGGTATAG 1299 0.4511 MAATRSIGNCILRNHSVCFSTASCYRKQISLASLFQRYGFPPSQIPHFISNNSFLLDSNIPELEKSLATLFSFRIPQNAVVSLIRNCPAVLEPKFLQNWEQGLSKLKAMNPSSSMIVNFLECSRRFQLDPVEASKKVEELKGLGFSDDVVWKVLEGFPSVIAVSRRQLASVIEFLVEFGIPRDEVVDRVVRLNPRVLGIGVEQRLKPLIRELEELRFPRNEIRTEVVRVPRILGMEIGEFSRCLRLLEGLKCREAIKERIFQDGLLRACFEVKLKVDCLCDHGLIRSDALKLLWKEPRLITYDVESIEKKIGFLVQRMNYSVDCLLHVPEYLSVNFEKQIVPRYNVMEYLKAKGALGFEVGLKDMVKPTRLRFYNLYVKPYPECEKIYGRFSGITKVKSKHPPGLWKLFKPPKFLTTDEDAKNLKSFMNTLV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0337 432 Gene3D Transcription termination factor 3, mitochondrial 164 391 IPR038538 -
Ahy11g0337 432 Pfam mTERF 275 373 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 Pfam mTERF 128 240 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 SMART mt_12 187 218 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 SMART mt_12 322 356 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 SMART mt_12 113 146 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 SMART mt_12 223 253 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Ahy11g0337 432 PANTHER CGI-12 PROTEIN-RELATED 43 428 IPR003690 GO:0003690|GO:0006355
Ahy11g0337 432 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 43 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0337 Ahy-Chr11 3882499 3887038 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy11g0337 mTERF 4.20E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0337 - - aip:107646489 800.045