Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0313 ATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCGTTCATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTCTGTTGAGAAGTTGACTCAAGTTTTGGAAGCTGAGCGAAACTCGCAAGAGATGTCAGAGCAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATTTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGATAAAAAATTTGTCTGCCATGGAAGTGAATATCGTTCGCCCATTCATCGGAAGAGCTTTACAGGCATTCTATAAGCACGATAGTCCGGAGTTGATACCGGATCCGGAGAGAGTTCCTGATAGGCGACCACAAGTAGTCCAAAATGCCCCAAGGAGGCAACTGCGAAGATAA 633 0.4487 MAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMSVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVPDRRPQVVQNAPRRQLRR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0313 210 CDD GINS_A_psf2 66 182 - -
Ahy11g0313 210 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Ahy11g0313 210 Gene3D - 12 77 - -
Ahy11g0313 210 Pfam GINS complex protein 54 162 IPR021151 -
Ahy11g0313 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
Ahy11g0313 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Ahy11g0313 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 191 IPR007257 GO:0005634|GO:0006260
Ahy11g0313 210 MobiDBLite consensus disorder prediction 185 210 - -
Ahy11g0313 210 Gene3D - 78 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0313 Ahy-Chr11 3532657 3540374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0313 1 146 Core DNA Replication Machinery Family AT3G12530 71.233 4.89e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0313 K10733 - gmx:100780528 381.333