LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g0291	ATGCACAATAACAAAACCAAGCTTCAAGCACCAACAACAATGGCTTCCTTTTCTTATTTGCAATGTTTGCTTGTGATTGTTACGGTGACAATGATGATTCCGACTACAACAAATGCAGCAGCACTCACTCCTAATTTCTATAAGAAAGTTTGTCCAAAAGCATTGCCAGTGATAAGGAGAGTGGTTCAAAAGGCAATAAATCGTGAAAGGCGCATGGGAGCTTCTTTGCTGCGTTTGCATTTCCATGATTGCTTTGTTAATGGATGTGATGGATCGATTCTGCTAGATGACACGAAGAACTTCACCGGAGAGAAGACAGCAAAACCAAACCTTAACTCAATCAGAGGTTTGGAAGTGGTTGATGAGATTAAGGCTGCTGTTGATAAAGCTTGCAAACGACCTGTCGTTTCATGTGCCGATATCTTAGCTGTTGCTGCTCGTGACTCTGTTGCCATTTTGGGTGGTCCACAATTTTGGTACAAAGTACTATTAGGAAGAAGAGACGCAAGAACCGCAAGCATAACCGCCGCAAATAACAACCTACCAGCACCATTCTTAAACTTCACACAATTGGTTACAAGCTTCAACAACGTTGGACTAAACACCAAGGACCTAGTTGTACTTTCAGGTGGCCACACAATTGGGTTTGCAAGGTGCACAACGTACAGGAATAGAATCTACAACGACACAAACATTGAAACTAATTTTGCAACATCTCTAAGGAGGAATTGTCCTAGGACTAGTGGTGTTGGGGACAACAATTTGACACCGTTGGATCCAACTCCATCAAGTGTTGATAATTTGTACTACAAAGCGTTGTTGGGCAAAAAGGGAATTTTACATTCGGATCAGGAGTTATATAAGGGGAATGGTAGTGAGAGTGATAAGTTGGTGGAGCTTTATAGCAAGAACCCTTTTGCGTTTGCTAGAGACTTCAAAAATTCAATGATCAAAATGGGTAATATGAAGTCTCTTACTGGAAACAATGGTGAGATTAGGCTCGATTGCAGAAGGGTTAATTAA	1023	0.4115	MHNNKTKLQAPTTMASFSYLQCLLVIVTVTMMIPTTTNAAALTPNFYKKVCPKALPVIRRVVQKAINRERRMGASLLRLHFHDCFVNGCDGSILLDDTKNFTGEKTAKPNLNSIRGLEVVDEIKAAVDKACKRPVVSCADILAVAARDSVAILGGPQFWYKVLLGRRDARTASITAANNNLPAPFLNFTQLVTSFNNVGLNTKDLVVLSGGHTIGFARCTTYRNRIYNDTNIETNFATSLRRNCPRTSGVGDNNLTPLDPTPSSVDNLYYKALLGKKGILHSDQELYKGNGSESDKLVELYSKNPFAFARDFKNSMIKMGNMKSLTGNNGEIRLDCRRVN*	341

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy11g0291	340	PANTHER	CATIONIC PEROXIDASE	20	339	-	-
Ahy11g0291	340	Gene3D	Peroxidase, domain 2	182	319	-	-
Ahy11g0291	340	Gene3D	-	45	337	-	-
Ahy11g0291	340	PRINTS	Plant peroxidase signature	203	215	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Plant peroxidase signature	314	327	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Plant peroxidase signature	135	145	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Plant peroxidase signature	75	95	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Plant peroxidase signature	256	271	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Plant peroxidase signature	115	128	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Plant peroxidase signature	51	70	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Plant peroxidase signature	272	289	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	ProSitePatterns	Peroxidases proximal heme-ligand signature.	204	214	IPR019793	-
Ahy11g0291	340	PANTHER	PEROXIDASE 72-RELATED	20	339	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	ProSitePatterns	Peroxidases active site signature.	73	84	IPR019794	GO:0004601
Ahy11g0291	340	Pfam	Peroxidase	59	303	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Haem peroxidase superfamily signature	73	87	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Haem peroxidase superfamily signature	258	273	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Haem peroxidase superfamily signature	136	153	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	PRINTS	Haem peroxidase superfamily signature	204	219	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	CDD	secretory_peroxidase	42	339	IPR033905	GO:0004601\|GO:0042744
Ahy11g0291	340	SUPERFAMILY	Heme-dependent peroxidases	42	340	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
Ahy11g0291	340	ProSiteProfiles	Plant heme peroxidase family profile.	41	340	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g0291	Ahy-Chr11	3281787	3285096	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy11g0291	40	340	Peroxidase	AT5G05340	59.603	2.81e-126	363

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g0291	K00430		-	gmx:100816056	490.345

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy11g0291	11	3281787	3285096	Ahy11g0291	11	3281787	3285096	ECH