LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g0274	ATGGCTAGAAAGAAAGTGGAGCTCAAATATATAGCAAATGATTCAAAGAGGAGGGCAACACAAAAGAAAAGGAAAAGTGGTCTGATAAAAAAGGCTGATGAGATTAGCACTCTTTGCGGGGTTGATGCTTGTGCTATAATCTATACCTCTGATGATCCACAGCCAGAAGTATGGCCATCGCCATCAGGGGTGAACCGAGTGATCTCTAGATTTAAGGAGATGCCTGAATTAGAACAAAGCAAGAAAATGATGTCTCAAGAGAGCTTCTTGAGACAAAGGATCCAAAAAGGCCAAGATCAACTAAAGAAATTAAAGAATGAGAATAGAAAGAAAGAAATGAACAATCTCATGTTTCAATCCTTAGGTGGCTACCAATCCCTTGACAATGCCACCATAATTGATCTCAATGATCTTGCATGGATCATTGATCAAAATATCAACGAGGTCAACAAGCAAATTAGCAAGCTTCAAGGGCAAGAAGGGACTAGTAGCAATAATAATGGAGTAGCAACCATCAATGGAGAGCAAGCTCAAGTGGACAATATCATCAATGGTGGTGTATTTCCATTTGTGGATAATATCATCAATGGAGAGCAAGCTCAAGTGGACAATATCATCAATGGTGGTGTATTTCCATTTGTGGATGCTGCTAATAATTTCCAAAATGATTATTGCCCAACCCCATTCAATCCTTGA	696	0.3908	MARKKVELKYIANDSKRRATQKKRKSGLIKKADEISTLCGVDACAIIYTSDDPQPEVWPSPSGVNRVISRFKEMPELEQSKKMMSQESFLRQRIQKGQDQLKKLKNENRKKEMNNLMFQSLGGYQSLDNATIIDLNDLAWIIDQNINEVNKQISKLQGQEGTSSNNNGVATINGEQAQVDNIINGGVFPFVDNIINGEQAQVDNIINGGVFPFVDAANNFQNDYCPTPFNP*	232

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy11g0274	231	PANTHER	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	1	167	-	-
Ahy11g0274	231	ProSiteProfiles	MADS-box domain profile.	1	50	IPR002100	GO:0003677\|GO:0046983
Ahy11g0274	231	SUPERFAMILY	SRF-like	3	95	IPR036879	GO:0003677\|GO:0046983
Ahy11g0274	231	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	1	167	-	-
Ahy11g0274	231	CDD	MADS_SRF_like	2	85	IPR033897	GO:0000981\|GO:0000987\|GO:0045944
Ahy11g0274	231	Coils	Coil	87	114	-	-
Ahy11g0274	231	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
Ahy11g0274	231	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	10	51	IPR002100	GO:0003677\|GO:0046983
Ahy11g0274	231	Gene3D	-	13	97	IPR036879	GO:0003677\|GO:0046983
Ahy11g0274	231	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g0274	Ahy-Chr11	3034074	3034891	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy11g0274	1	174	Type I MADS-box Gene Family	AT5G48670	50.568	9.33e-51	166

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-M-type	Ahy11g0274		SRF-TF	2.30E-15	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g0274	-		-	aip:107644294	454.907

Showing 1 to 1 of 1 entries