LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g0143	ATGACGGATTACCGGTCGACGCCAACGATGAATCTCTGGAACGATGAAAACTCCTCCGTCATGGAAGCCTTCATGAGCTCCTCCGACCTCTCCTCTCTCTGGCTCCCTCCGCCACAATCCGCCGCCTCCACCTCCACCTCCGCAGCACCACCACCACCACAGCAACAACAACCACCTCCTCCACCGCCGTTCAACCAGGAAACCCTTCAGCACCGACTCCAAGCCCTAATCGAAGGCGCAAGAGAGAGCTGGACCTACGCAATCTTCTGGCAGTGCTCCTACGACTACTCCAATGGCCTCACACTCTTAGGTTGGGGCGACGGTTACTACAAAGGCGAAGAAGACAAAGGCAAAGCCATAAAAGCGACGTCGTTTGAGCAGCAGCAACACCGTAAGAAGGTCCTTAGAGAATTAAACTCTTTAATTTCAGGTCCTTCAGCTTCTGGCGACGAAGCGGTAGACGAAGAAGTAACCGACACCGAATGGTTCTTTCTTATATCCATGACTCAGCATTTCGTAAGCGGAACAGGCCTTCCTGGTCAGGCTTTCTTTAATTCGAATCCGGTTTGGGTTGCCGGTCCTGAACGGTTATTAGGCTCGGGCTGTGACCGGGCCCGGCAAGGTCAGTCGTTTGGGATACAGACCATAGTTTGTATACCTTCAGCAAACGGCGTGGTTGAGTTGGGTTCCACGGAACTCATTTATCAGAACCCGGATCTGATGAGTAAGGTGAAGGTGTTGTTCAATTTTAGTAACAGTAGTGGTGACGTGGCTGGATCCTGGCCCTTGAGTTCTGCAGATCAAGGAGAGAACGATCCTTCTTCGTTGTGGCTCAACGACCCTTCTTCTTCGGCTGGTGGGATCGAAATTCGAGATTCTGTTAATACGGCTGCGACTACGACGGTTGCCAACAACAAAACGGTGCCGGTTGTATCCAATCCTGGCTCCTCCAGCGTGGTAACTGAAGCTCCGAAGAATCCGCAACAGAATCAAGGGTTTGTGCTGAAGGAATTGAATTTCTCGAGCTCGTTAAAGCCGGAATCTGGCGAGATTCTGAGTTTTGGAGAGAATAAGAAGGGTTCTTATGGTGTAAACAGTAATAACGGTGGAAACAATTTGTTCTCTGTTCAGTCTCAGTCGCAGTTTGTCTCCGATGAGAACAAGAAGAGGAGATCCCCTACTTCTCGGAGCAGCATTGAGGATGGAATACTGTCTTTTACTTCCGGCGTGATCTTGCCGGCTTCGAATGCGAAGTCCGGTGGCGGCGGAGGCGGAGATTCGGATCATTCGGATTTGGAAGCTTCTGTGGTGAAGGAGGCCGTTGAGCCGGAGAAGAGGCCGCGAAAGAGAGGGAGGAAGCCGGCAAACGGAAGGGAGGAGCCGCTCAATCATGTGGAGGCAGAGAGGCAGAGAAGGGAGAAGCTCAATCAGAGGTTTTATGCTCTTCGAGCCGTGGTTCCCAATGTGTCGAAGATGGACAAGGCTTCGCTGTTGGGAGATGCTATCTCATACATCAACGAATTGAAATCGAAGCTACAAGGGCTGGAATCGGAGAAAGGCGAATTGAGCAAGCAATTGGAAGATTCCAAGAAGGAGCTGGAGCTGGCTAGTAAGAATTCAGGGGCTGCACAGGCCGCCCCACCGCCTCTTCCTGCGCCACCGGATAAGGAACAAAGGAGTCGTGCTGGAGTAAATGGGAAATTGATTGATTTGGAGATTGAGGTGAAGATTATTGGTTGGGACGCCATGATTAGGATCCAATGTAGCAAGAAGAACCACCCCGCAGCGAGGCTGATGGCGGCGCTGAAGGACCTGGACTTGGAAGTGCACCATGCCAGTGTGTCAGTGGTGAATGATTTGATGATTCAGCAGGCTACGGTGAACATGGGAAGCCGGTTTTACACACAGGAGCAGCTCATGTTAGCGCTATCATCCAAAGTTGGCGGCGGCGGAGATGCTAAGTAG	1965	0.5165	MTDYRSTPTMNLWNDENSSVMEAFMSSSDLSSLWLPPPQSAASTSTSAAPPPPQQQQPPPPPPFNQETLQHRLQALIEGARESWTYAIFWQCSYDYSNGLTLLGWGDGYYKGEEDKGKAIKATSFEQQQHRKKVLRELNSLISGPSASGDEAVDEEVTDTEWFFLISMTQHFVSGTGLPGQAFFNSNPVWVAGPERLLGSGCDRARQGQSFGIQTIVCIPSANGVVELGSTELIYQNPDLMSKVKVLFNFSNSSGDVAGSWPLSSADQGENDPSSLWLNDPSSSAGGIEIRDSVNTAATTTVANNKTVPVVSNPGSSSVVTEAPKNPQQNQGFVLKELNFSSSLKPESGEILSFGENKKGSYGVNSNNGGNNLFSVQSQSQFVSDENKKRRSPTSRSSIEDGILSFTSGVILPASNAKSGGGGGGDSDHSDLEASVVKEAVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQGLESEKGELSKQLEDSKKELELASKNSGAAQAAPPPLPAPPDKEQRSRAGVNGKLIDLEIEVKIIGWDAMIRIQCSKKNHPAARLMAALKDLDLEVHHASVSVVNDLMIQQATVNMGSRFYTQEQLMLALSSKVGGGGDAK*	655

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy11g0143	654	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	69	248	IPR025610	-
Ahy11g0143	654	MobiDBLite	consensus disorder prediction	261	282	-	-
Ahy11g0143	654	MobiDBLite	consensus disorder prediction	30	67	-	-
Ahy11g0143	654	MobiDBLite	consensus disorder prediction	536	563	-	-
Ahy11g0143	654	SMART	finulus	465	514	IPR011598	GO:0046983
Ahy11g0143	654	CDD	bHLH_AtAIB_like	456	532	-	-
Ahy11g0143	654	Gene3D	-	451	539	IPR036638	GO:0046983
Ahy11g0143	654	MobiDBLite	consensus disorder prediction	30	50	-	-
Ahy11g0143	654	MobiDBLite	consensus disorder prediction	307	328	-	-
Ahy11g0143	654	SUPERFAMILY	HLH, helix-loop-helix DNA-binding domain	462	527	IPR036638	GO:0046983

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g0143	Ahy-Chr11	1469740	1472421	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy11g0143	1	648	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT1G32640	56.166	0.0	651

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bHLH	Ahy11g0143		bHLH-MYC_N	7.20E-53	CL0161

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g0143	K13422		-	gmx:100790854	767.689

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