Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0089 ATGGCTCGCTCTCTTCCTTTGCTTTCCACCATTTTTGTCCTCCTTTTGCTTCTAGTGGCCACTGAGATGGGACCAATAATGGTGGCTGAAGGTAGAACTTGTGCGTCTCAAAGCCATCGCTTCAAAGGAGTGTGTTTGAGTGACACAAATTGCGCCTCCGTTTGCAAAACGGAGGGCTTCCCTTCCGGGGATTGCCACGGCTTTCGCCGCCGATGCTTCTGCACGAAGCATTGTGCTTAA 240 0.5125 MARSLPLLSTIFVLLLLLVATEMGPIMVAEGRTCASQSHRFKGVCLSDTNCASVCKTEGFPSGDCHGFRRRCFCTKHCA* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0089 79 Pfam Gamma-thionin family 32 78 - -
Ahy11g0089 79 Gene3D - 32 78 IPR036574 -
Ahy11g0089 79 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Ahy11g0089 79 CDD Knot1 43 75 IPR003614 GO:0006952
Ahy11g0089 79 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Ahy11g0089 79 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Ahy11g0089 79 SMART gth_4 33 78 IPR003614 GO:0006952
Ahy11g0089 79 PANTHER DEFENSIN-LIKE PROTEIN 1 1 78 - -
Ahy11g0089 79 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Ahy11g0089 79 PANTHER DEFENSIN-LIKE PROTEIN P322 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0089 Ahy-Chr11 901814 902589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0089 1 78 Plant Defensins Gene Families AT2G02120 62.821 1.21e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0089 - - gsj:114420878 127.872