Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0078 ATGGAGCCTCAGACTCAGGAAGCATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCATAATGTTAGTGATCATGTGGATGAAGACGTAACTTCTGATGCGGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTGATTTTTCAAGTCTATCTATGAAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAGCATATGTTTGTTCTTGTGAAGGGTATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTTTTCTTTGATGCGGTAATTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACACAATCATGATCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATACCAAACATATTTGGGTCATTAGCTAGCCAGTGTGGTGGGTACGAGAACGTTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCGAAGCAAAGAAGACAATTACCTGATGATTTAACCTCTGCAATGGCTTACCTGGAAATGCTAGCAGCAAGGGATCGAAACTTGTTCTATAGTGTTGAAAAGGGCAGAGAAGGAGTGTTTCGGCAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTGTTCGGAGATGTGCTAGCATTTGACGCCACATATAAGAAGAATAGATACAGATTGCCGGTGGTAATATTCTCGGGAGTTAACCACCATAATCAAACCGTTGTATTTGGTGCTGCGATAGTTTCGAATGAGAGGAAAAGCACCTATGTGTGGTTACTAAAACAGCTTCTCATAGCAATGAAGGGAAAGATACCGACTTCAGTAATTACGGATGGTCATCAATCGATGGCTATCGCTATTCAGGAGGTGTTTCCGAATGCACATCATAGGTTATGTGCATGGCACTTGATGCGTAATGCAACAAGCAATATTCACAAACCTCAGTTTACGAAAATGTTTACAAAGTTAATGCTAGGTGATTACGAAGTTGGTGTGTTCGAACAAAAGTGGGAGGAAATGGTTGGATTCTTTGGAGTGGAAGATCGGGAATGGATAGCAGATATGTATGGGAAAAGAAACATGTGGGCTACCGCTCATATCCGAGGAAAATTCTTTGCTGGGTTTAGAACGACTTCGAGGTGTGAAAGTCTACATGCTGTCCTCAAAAGATATGTTAAATCACGCTATAATTTGACAGAATTTGTTCAACACTTCCAGCGTTGTTTGAGCTACATGCGGCACAGAGAGGATTTGGCAGACTTTAAATCATCAACTGGACAACCTGTGATGCAGACACACTTTCAACAATTAGAAAGGTCAGCAGCTACCATTTATACCCGGCAAATTTTTGTCTTGTTCCGTTCAATGCTCCACAAGGCCAGCACATTGAAGGTAATATATGAAGAGGAAAAGAGTTCTTGCAAGATTTATCAGGTGTCAAAATTTTACAAGCCTAATATGATATGGCATGTGTCTTTTCACGGAGAGCAAGATGAATTTAAATGCTCATGCATGAGAATGGACTCCATAGGTATTCCATGTAGTCATATACTTGCTGTTTTGGGTTTTCTAGACATTGCAGAGCTGCCAAAATCATTAGTGCTGCGAAGATGGACTAGAAAAGCGAAGGAAGGCATTAGTGGGTATGATGACATGGGCGGCTTGATGGAGGATTCCTTGGCTATCAGTCGGCGTGCATGTTTGGCACATTGGTGTAAACAAATTATGAACGAAGGGTGCCTAAAAGGGGATATTTTTAATGAATCACGAGATGCATTGGTAAATATACTTTCATGTATTAGGGCTCATAGCGGGGACAATAACATGATGGAGGAGCATGCGGAATACATGTATGAAGACCTTGCAAAGAATGGAAGTACTGAGATAGAGACCACAAGGAAGCCTAAGCGTTGCAGCTACTGTCGCAAGGGTGGGCATAACATTGCTACGTGTTCTATGAAGAAAATGGATGAAAGGACTCCCCAATTTGATGATGACGCTGCGGAGAATATTGAGGGTGAAGACTACTCCTTCGTAGATGCTGAAAGTGATGAGTATGTTCACACTGAATGGTTTGAGGAGGAAGATGAATATTTAGATTCCTCAAGGTATTATGAACAGAGTGGTGGCGAGACTGAGTCCTCAATGGATTACGATTCTGGTGGGGCAAATGATGATGATGATGATGCAGAGTTGTGA 2415 0.4066 MEPQTQEASNSQRHTSDQNVHNVSDHVDEDVTSDAVDMDQYRINSWEDIGKIDFSSLSMKNICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKAYVCSCEGYRLEKWNHMKNRVREPKPETRCGCMSKLHVFFDAVIESWVVRDFCDEHNHDLVVPKLARMLRSHKKMTEPDISQMNHMKEVGISIPNIFGSLASQCGGYENVNFSIKDMHNQVAKQRRQLPDDLTSAMAYLEMLAARDRNLFYSVEKGREGVFRQIFWCDGRCQLDYDLFGDVLAFDATYKKNRYRLPVVIFSGVNHHNQTVVFGAAIVSNERKSTYVWLLKQLLIAMKGKIPTSVITDGHQSMAIAIQEVFPNAHHRLCAWHLMRNATSNIHKPQFTKMFTKLMLGDYEVGVFEQKWEEMVGFFGVEDREWIADMYGKRNMWATAHIRGKFFAGFRTTSRCESLHAVLKRYVKSRYNLTEFVQHFQRCLSYMRHREDLADFKSSTGQPVMQTHFQQLERSAATIYTRQIFVLFRSMLHKASTLKVIYEEEKSSCKIYQVSKFYKPNMIWHVSFHGEQDEFKCSCMRMDSIGIPCSHILAVLGFLDIAELPKSLVLRRWTRKAKEGISGYDDMGGLMEDSLAISRRACLAHWCKQIMNEGCLKGDIFNESRDALVNILSCIRAHSGDNNMMEEHAEYMYEDLAKNGSTEIETTRKPKRCSYCRKGGHNIATCSMKKMDERTPQFDDDAAENIEGEDYSFVDAESDEYVHTEWFEEEDEYLDSSRYYEQSGGETESSMDYDSGGANDDDDDAEL* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0078 804 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 618 IPR031052 GO:0006355
Ahy11g0078 804 SMART 26again6 572 599 IPR006564 GO:0008270
Ahy11g0078 804 Pfam SWIM zinc finger 574 593 IPR007527 GO:0008270
Ahy11g0078 804 MobiDBLite consensus disorder prediction 777 791 - -
Ahy11g0078 804 Pfam MULE transposase domain 284 378 IPR018289 -
Ahy11g0078 804 MobiDBLite consensus disorder prediction 769 804 - -
Ahy11g0078 804 MobiDBLite consensus disorder prediction 1 31 - -
Ahy11g0078 804 PANTHER OS02G0262500 PROTEIN 67 618 - -
Ahy11g0078 804 MobiDBLite consensus disorder prediction 1 18 - -
Ahy11g0078 804 Pfam FAR1 DNA-binding domain 75 164 IPR004330 -
Ahy11g0078 804 ProSiteProfiles Zinc finger SWIM-type profile. 561 597 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0078 Ahy-Chr11 766170 771263 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g0078 MULE 8.40E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0078 - - ahf:112719698 1628.99