LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g0063	ATGGATGAGGCTAGACCTCGGAATAATGAAACTGCTGCATCATCATCATCGCCTTCAGCTTCGCGGTTGCCGGTGTCTTCCGGATGGCGTCCGAGCCGGGCTGTGTTTGCTCCTTATGGGCCACCACAGGGTGAAGAAGCCACAGCTCAAAGGCCACAGAGATTGAGAGTGGCAGTGACAGTGAGGAAGCCTTTGGTGGCAAGATTGACCAAGGAGATAGTTGAAACATATCAAACATGCAATCCAAAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACGAGTCCATCAATTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATTCTGACAGTGAATTTTGTCTTGGTCCATGTAGAGAAAAATAAAAGATATATTGTCAAAGATCTTCTTGGCCATGGGACATTTGGTCAAGTGGCGAAGTGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCACTGGTTGAAGTAACTATATTGACGACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCATATTGTTCGTATATATGATTATTTTGTGTATCAACGGCATTTGTGCATATGCTTTGAACTACTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTCAGAGGATTATCGCTTAGCATTGTTCAGCTATTCTCTAAGCAGATTTTATGTGGACTGGCTCTATTAAAGGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACAAGCACTGTGAAGCCAGCAGAAATCAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCCTATATTCAGAGTCGATATTACAGATCCCCTGAGGTTCTTCTTGGATATCAGTACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTATTTCCCGGGGCTTCAGAATTTGATCTTTTGAGGCGGATGATTGAAATACTTGGAGGACAGCCACCTGATTATGTATTGAGGGAGGCCAAAAACACAAGTAAATTCTTCAAGTGTATTGGAAGTCTCCAGAGCATAGAGATTAGTGAGGGTTCCAAAAATGGAAGAAGTGTTTATCAAGCATTGACGGAGGAAGAGTATGAAGTTAGAGAATTGAAGAAGCCAACTGTTGGAAAGGAGTATTTTAATCATATGAACCTTGAAGCAATTGTTACAAACTATCCCTATAGGAAAAACCTTCCCAAGGAAGATATTGTCAAAGAAAGTCAAATAAGATTGGCTCTTATTGATTTTTTGAGAGGACTTGTTGAGTTCGATCCTGCGAAACGATGGTCACCTTTCCAGGCCTCAAAACACCCTTTTGTAACTGGAGAGCCTTTTACACAACCTTATCAGCCTCCCCCAGAGACCCCTCGTGTGCCGGTGGTTCAAACTGTCAAGGTGGATAATCATCCAGGTGGAGGGCACTGGTTTGCTGCTGGCCTATCACCTAATGTTCCAGGAAAAAATAGAGCTTCGATCTATAGCAACGCACATTTTCAGATGATGCAGTATCCTCCTTCTAATAGTTATGGTAGCGTAGGAAGCCATGGGAGCTATAATGAGAGCATTGGGCTTGGTAGCAGCTATGGAAGTTATGGAGACAATAGTAACATGTTTCCTTACTATTCACCGGTTGGTCCATCTGGTATGAACATGCATAACCAAGGTGGTATGGCAATGCTTGGAAATAGTCCTGATGCTCGGAGGAGAGTTAAGTATCAACCCGGGAGTGGGCTCGGTATAAGCCCTTCAGCAGGAAATTTTACCCCCATGCCTCTTGGTGCCAGCCCCTCTCAGTTCACTCCGCCTAGTTCCTTTGGTCAAGTTGGTTCTCCCGGACACTATGGACCTACATCTCCAGCGAGAGGAACCACTCATGGATCACCTTTAGGGAAGACACCTGCAGTTAGCCAATTTAATCGACGGAAAAACTGGGGATATTCGGGAAGTCCTCAACCTCAAGAAACAGTATTTTCTTCACATTGGCAAGGACAAGGTCCTGACAACTCAAGCCTTCCCGAGGGAACATCCCAAGCCTTTGGCAGCTCCCCGTCTTACGTGCAGTCAAATATGAATCCTGGAACCTGGAAGCAGCGAGGAAGTGGAGGGTTATCTTCGAATTTGGCAGTGCAGTCAACAGAGTTGGCTCATGACAATGCAGATTCAGGCATGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAACTACTACTGCAAGATGATGGTGCAGATGAAAGTTCCTTGACAAATGATTTTTCTAGAAGCATGAGTCTTGGTTCCACGGAACCGTGGGTTGGATTGGGAAGGTTGAACCATGGAACCAGTACAAGCTCTCCAATGATCGTACAGAGAATACCCGCATCAGGTCAAGCATTTTCTGGTGAGATGGGTAGCTCTCCAATGCATCATGATCTTCAATACATGTCAAAGCCTTTTCATTATATACCTCATGTTTTACAAAATTCTCCAAGCCGATTCGGTCACCAACCTACTCAAAGGTTTCCACATGGTAGACCTCCCCAGAGTGGCGACTGGAATCAGCTTAAGGTTGCACCTCCTCCTCCTAGTTTCGGTAGTGTAGGCCAACGCTCTCCCAGGAATAGCTCATTCTCCAACAACATGACATGGGGGCGAAGAATGAATCCTCCGGTTTCAAGCATGCCACCAACATCTCGCGCAAGAAAAGATTATGCAAGGATTGACTAA	2814	0.4367	MDEARPRNNETAASSSSPSASRLPVSSGWRPSRAVFAPYGPPQGEEATAQRPQRLRVAVTVRKPLVARLTKEIVETYQTCNPKFKYSEDLNPKRFLTSPSIGVLNDGYDNVNSDLILTVNFVLVHVEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLSIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLREAKNTSKFFKCIGSLQSIEISEGSKNGRSVYQALTEEEYEVRELKKPTVGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLRGLVEFDPAKRWSPFQASKHPFVTGEPFTQPYQPPPETPRVPVVQTVKVDNHPGGGHWFAAGLSPNVPGKNRASIYSNAHFQMMQYPPSNSYGSVGSHGSYNESIGLGSSYGSYGDNSNMFPYYSPVGPSGMNMHNQGGMAMLGNSPDARRRVKYQPGSGLGISPSAGNFTPMPLGASPSQFTPPSSFGQVGSPGHYGPTSPARGTTHGSPLGKTPAVSQFNRRKNWGYSGSPQPQETVFSSHWQGQGPDNSSLPEGTSQAFGSSPSYVQSNMNPGTWKQRGSGGLSSNLAVQSTELAHDNADSGMPDPGDWDPNYSDELLLQDDGADESSLTNDFSRSMSLGSTEPWVGLGRLNHGTSTSSPMIVQRIPASGQAFSGEMGSSPMHHDLQYMSKPFHYIPHVLQNSPSRFGHQPTQRFPHGRPPQSGDWNQLKVAPPPPSFGSVGQRSPRNSSFSNNMTWGRRMNPPVSSMPPTSRARKDYARID*	938

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy11g0063	937	ProSitePatterns	Protein kinases ATP-binding region signature.	138	161	IPR017441	GO:0005524
	Ahy11g0063	937	MobiDBLite	consensus disorder prediction	611	739	-	-
	Ahy11g0063	937	MobiDBLite	consensus disorder prediction	8	26	-	-
	Ahy11g0063	937	PANTHER	BNAC04G29850D PROTEIN	26	884	-	-
	Ahy11g0063	937	Pfam	Protein kinase domain	133	475	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy11g0063	937	MobiDBLite	consensus disorder prediction	614	646	-	-
	Ahy11g0063	937	Gene3D	Transferase(Phosphotransferase) domain 1	213	476	-	-
	Ahy11g0063	937	ProSiteProfiles	Protein kinase domain profile.	132	475	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy11g0063	937	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	26	884	-	-
	Ahy11g0063	937	MobiDBLite	consensus disorder prediction	861	937	-	-
	Ahy11g0063	937	MobiDBLite	consensus disorder prediction	1	28	-	-
	Ahy11g0063	937	SUPERFAMILY	Protein kinase-like (PK-like)	125	499	IPR011009	-
	Ahy11g0063	937	Gene3D	Phosphorylase Kinase; domain 1	97	212	-	-
	Ahy11g0063	937	MobiDBLite	consensus disorder prediction	896	924	-	-
	Ahy11g0063	937	CDD	PKc_YAK1	132	475	-	-
	Ahy11g0063	937	MobiDBLite	consensus disorder prediction	655	739	-	-
	Ahy11g0063	937	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	255	267	IPR008271	GO:0004672\|GO:0006468
	Ahy11g0063	937	SMART	serkin_6	132	475	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g0063	Ahy-Chr11	637853	647190	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy11g0063	131	361	MAP Kinase Gene Family	AT3G18040	33.740	2.42e-31	127

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-YAK	Ahy11g0063		Pkinase	1.20E-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g0063	K18670		-	gmx:100792777	1567.75