Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0061 ATGATTTTTCGGAAGTTGCAAGTTGCAAGTCCACACTCCTCTGACTCTGAAACACAAACCATGATGGCAACACTCTTCAGAAAACTATGCGTTTGCAGTGAAACGGCGTCGTATAACAACCCCCGACCCTCATCCGAAGCTGCTGCTTCTTCAGGTTCGTTGCTGGAATCACTTCCAAACGAGATTGTGATGCAGATCGTACGGTTATTGGGCCCAAAGCAGGCCGCTCAGCTCAGCGTGGTTAACAGAAAGTGGCGATCCCTCATCTCCGATAACGAACTCTGGGCCCACTTTCTTGAGGTCCACCATCCTCAGCCATGGGATTCCGTGCTTTTCTCCGAGACTTTTCTGGCCTCTGCTTACCCTCTTCTTCCTCTTCCAACCTCAGTTGCTGAGATGCCATCTGTGTCATTCAAGCAAGTTTATGGCCAGCGTGCAAGACTGCCTTGTTCTGTTATCATTGATGGTGGTTCTGGCTATTGCAAATATGGTTGGAGCACACTCCCTTGTCCATCATGGCGGTCGGCGACCTTTCTGGAATTTGGTAATGTGGAAACGCCAATATACACCAGACTCAGACACTTTTTTTGGACTATTTATAGCAGGATGAAGGCGAAACCAAGTTCTCAACCAGTTGTTGTTTCTATACCAATATGCCACTATGACGATACTGAATCAGCCAAAGCCTCAAGGCGGCAGCTTAAGGAAGCAATCTATACTGCCCTGTTTGACATGAATGTTCCTGCTGTTTGTGCTCTAAATCAGGCAGTTCTAGCTCTTTTTGCTGCCAAACAAACTTCTGGAATAGTTGTGAATATAGGTTTTCAAGTCACATCTGTTGTTCCAATTTTAAATGGCAAAGTGATGCGAAAAGTGGGTGTGGAGGTTGTGGGGTTGGGAGCCCTAAAGCTCACTGGATTCCTTAGAGAACAAATGCAACAGAATAACATGAGTTTTGAATCAATGTACACTGTTCGAATGCTGAAAGAGAAGCTATGCTATGTTGCTATTGATTATGAAGCAGAGCTATCTAAAGATACACAAGCATCATTTGAAGCTGCAGGAGAAGGATGGTTTATACTTAAAAAAGAGCGCTTTCAAACCGGAGAGATCTTATTCCAGCCACGTCTTGCCGGAGTACGAGCAATGGGTTTGCACCAGGCCGTTGCTCTGTGCATCGACCATTGCCATTCTGCAGAATTAACCGCGGACACGAATTGGTTCAAGACCGTAGTCTTATGTGGGGGCAGTGCATGTTTACCAGGTTTGGCAGAGAGATTAGAGAAAGAACTTCATGCCTTGGTTGATCCCAACCTGTCAGACAGAATCACAGTCATACCTCCTCCATATGGCGCGGATTCGGCATGGTTTGGAGCAAAGATGATTGGCAATTTAAGTACCTTTCCTGGTCCATGGTGTATAACAAAGAAGCAGTTCCGTCAAAAGCATAAAACTAATCGGATATGGTGA 1470 0.4565 MIFRKLQVASPHSSDSETQTMMATLFRKLCVCSETASYNNPRPSSEAAASSGSLLESLPNEIVMQIVRLLGPKQAAQLSVVNRKWRSLISDNELWAHFLEVHHPQPWDSVLFSETFLASAYPLLPLPTSVAEMPSVSFKQVYGQRARLPCSVIIDGGSGYCKYGWSTLPCPSWRSATFLEFGNVETPIYTRLRHFFWTIYSRMKAKPSSQPVVVSIPICHYDDTESAKASRRQLKEAIYTALFDMNVPAVCALNQAVLALFAAKQTSGIVVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREQMQQNNMSFESMYTVRMLKEKLCYVAIDYEAELSKDTQASFEAAGEGWFILKKERFQTGEILFQPRLAGVRAMGLHQAVALCIDHCHSAELTADTNWFKTVVLCGGSACLPGLAERLEKELHALVDPNLSDRITVIPPPYGADSAWFGAKMIGNLSTFPGPWCITKKQFRQKHKTNRIW* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0061 489 SUPERFAMILY Actin-like ATPase domain 266 480 IPR043129 -
Ahy11g0061 489 PANTHER ACTIN 110 485 IPR004000 -
Ahy11g0061 489 Pfam F-box-like 56 97 IPR001810 GO:0005515
Ahy11g0061 489 Gene3D - 45 121 - -
Ahy11g0061 489 Gene3D - 256 454 - -
Ahy11g0061 489 SUPERFAMILY F-box domain 43 145 IPR036047 GO:0005515
Ahy11g0061 489 SMART actin_3 149 487 IPR004000 -
Ahy11g0061 489 CDD NBD_sugar-kinase_HSP70_actin 152 296 - -
Ahy11g0061 489 SUPERFAMILY Actin-like ATPase domain 152 271 IPR043129 -
Ahy11g0061 489 Pfam Actin 224 480 IPR004000 -
Ahy11g0061 489 Gene3D - 192 483 - -
Ahy11g0061 489 PANTHER ACTIN-RELATED PROTEIN 8 110 485 - -
Ahy11g0061 489 ProSiteProfiles F-box domain profile. 52 98 IPR001810 GO:0005515
Ahy11g0061 489 Gene3D Actin; Chain A, domain 4 299 382 - -
Ahy11g0061 489 SMART fbox_2 58 98 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0061 Ahy-Chr11 626926 631429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0061 198 481 Cytoskeleton Gene Families AT3G12110 30.717 5.57e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0061 K16616 - gmx:100804254 676.396