Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0043 ATGGATGAGTTGACGCAAGCTCTCTTTGATGCTGATGACGTCATCGACGACATAGCTACCGAAGCTCTCCGTCGTAAAGTCGAAGCCCGCCATCGAACTCTTCCTGGCAAGGTGCGGAAGGTCCTTACCTCTCCTTTCAAGCAGCCTTATAGAGAGATCAATTCTGAGATGCAGAAATTGTTTGAGAGATTAGAGCATTTTGCACAAAGAGCACACAACCTTCCATTGGAAAGAGGTGTTTCTGAGAGTGTTTGGCGTGCAACACCTACAAATTCTGCGGTCGATGAAACTTCTATTTGTGGGAGAGATGATGAAAAACAAAATCTTAAAAAGTATTTGTTGTCAGAAGATGTTACTGTTGGTGGCAATAAAATTGGAGTTCTTGCTATTGTTGGCATGGGAGGGCTTGGAAAAACAACCCTCGCTAAACTCCTATATAACGATGTTGAAGTTAAAGAGAAGTTTGAGGTGAAAGCTTGGGCATCTGTCACAAAAGATTTTGATGTTGTCAAGTTGACAAAATCTCTTATTGAATCTGTCACATCTGCACCAACAAATATTGATAACTTTGATACTTTGCGAGCAGAGTTGCAAAAGAACTTGTCGGGTAAAAGATATCTGCTTGTGTTGGATGATATATGGAATGCAGGGTATGTTGATTGGACCAATCTGATGCACGTTCTTAATGTTGGAGAATCAGGAAGTAAAATCATTGTTACAACACGACATCAAAGTGTTGTGGATATTGTAAAAGCTGTGTGCACCTGCTCTCTGAAACCATTGGCCAATGAAGATTGTTGGATTTTGCTTTCCAAACATGCCTTTGGTGTACATCAATGCACTAAAGAGTCCAACCTAGAAGAAATTGGAAGAAAAATTGCCAAAAAGTGTGACGGCTTGCCATTAGCTGCGGTTGCTTTAGGGGGTCTTCTTGGCACAAACTTATCAGTCGAATACTGGAATAAAGTGTTAACGAGCAACATCTGGCATCTGACAGCGAAGGACGTTCAACCTGCTTTGCTTTTGAGCTATCATTTCCTTCCAGCTTCTTTGAAACAATGCTTTGGTTATTGTGCAATTTTCCCAAAGAACTCAGAGCTGCACAAAGAGAAGTTAGTTCAGCTATGGATGGCACAGGGATTTGTTTATGTGTCCCAAAATGAGAAAAGCATTGAAGAAGTAGGCGGTGAATACTTTGATGAACTAGTGGCAAGGTCATTGATAAGACGTTCTGCGGATGGGGAACACTTTGAAATGCATGACCTCATCAACGATTTGGCAACCATGGTTTCTTCCCCATATTGTAAGAGGCATGACAATGAAATGCAACTCGGAAATCTAAACAAAATTCGTCATTTATCTTATGATAAAAGAATGTTTAACCATTTTGGCGAACTTGATTCCCTTCATGGATTGAAAGGCTTCCGTACACTCACAGCATTACCGTTGGAATTTGAGTTCTGGATTCCCGGCCATTACCTAGCGAATGGGGTATTGCATGAGTTGTTGGTAGCATTGAAACAGCTGCGGGTGTTATCACTGTCAGACTACAGGAATATCACTGTTTTGCCGAATTCTATTGGTGATTTAAAGCATTTGCGATACCTAGATCTATCTTGCAGTGGAATTGAAAGGTTGCCTCCTGCAATATGCAAGCTCTACAATCTACAGACCTTGTTGTTATCTTATTGTGTTGCTCTTACTGAGTTGCCTGAGGAGATGGGAAAATTGGTGAATCTACGGCGCCTTGATATTGATGGTACTGATTTGCAGGATATACCCGTAGAAATAGCCAGATTAGAAAATCTGCAAAGTCTGAATGGTTTTATTGTCAGCAAACAACAACATGGACTGAAGCTTGCAGAAATGAGAAAATTTCCCCATTTACAAGGTAAACTCTGCATCTCAAAACTTGAAAATGTTATTGATCTGTCTGATGCTTGTCAAGCCAATTTGAAGGAGAAAAAGCAAATTGAAGAGTTATCATTGGAATGGAGTGATTCCACTTTGGAAGACTCCCATCAAGTTGTACTTGAACATCTGCAACCCTCAACTAATTTGAAGAAATTGACCGTTAAATGCTATGGTGGAACTAGTTTCCCAAATTGGTTGGGTGATTCCTCGTTTGGCAACATAGTGAGTTTGTGGATTGAAGATTGTCATCATTGTTCTTCATTGCCACCTCTGGGACGACTACAGAGTCTAAAAAAACTCTTCATTTTGGGTATGAAATCAGTGAAGAGTATTGGGTCTGAATTTTACGGAGGTAATTCCCCTTCTTTCCAACCGTTTCCCTCCTTGGAGACTTTGACATTTAAGTCGATGGAAGAGTGGGAGGAATGGAACATGATAGATGGTATAACAACTGAGTTTCCCTGTCTATCAAACCTATCTCTGAGAAGGTGTCCGAAACTGAAAGGAAATTTACCCAGCAATCTTCCTTGCTTAATTCGACTTTTTGTATGGGATTGTTGTCTACTTGAATCAGAGTTTTCAGGAGAAGTGGATAACAGAAACATAATGAGACGAATGAATGTATTCAATTTTAACTCTCTTCAAGAATTATATCTCTATGAAATTCCTTCTCTGACGGCCTTCCCGAGCAATGGTCTGCGCAAAGCGTTAAAGACACTTTCTATCGAATTTTGTAAGAACCTTGAATTCCCAAGTCATGAGTTCCTACATAGTTACAAGGCACTTGAGGATCTGAAGATAATGAGTAGCTGTTGCTCGCTGACGTCATTTTCCTTAGGCTCTCTCCCTGTGCTCAAGCGTCTTAATCTTTTGGATTGTAAAGAATTAAAATCAATTTCAATTTTGGAAGAAGCAGCAGCAAGGCAGTCTCTCATGTTTCTTGAACATCTCCAAGTAGAAGAGTGTCCTGAACTGGAGTCGATTTCCCTACTCGATTTGTGCACTCCTAACCTGAGTTATTTTGAGAAGAGGGTTTGCCTATCAATTTAA 2964 0.4035 MDELTQALFDADDVIDDIATEALRRKVEARHRTLPGKVRKVLTSPFKQPYREINSEMQKLFERLEHFAQRAHNLPLERGVSESVWRATPTNSAVDETSICGRDDEKQNLKKYLLSEDVTVGGNKIGVLAIVGMGGLGKTTLAKLLYNDVEVKEKFEVKAWASVTKDFDVVKLTKSLIESVTSAPTNIDNFDTLRAELQKNLSGKRYLLVLDDIWNAGYVDWTNLMHVLNVGESGSKIIVTTRHQSVVDIVKAVCTCSLKPLANEDCWILLSKHAFGVHQCTKESNLEEIGRKIAKKCDGLPLAAVALGGLLGTNLSVEYWNKVLTSNIWHLTAKDVQPALLLSYHFLPASLKQCFGYCAIFPKNSELHKEKLVQLWMAQGFVYVSQNEKSIEEVGGEYFDELVARSLIRRSADGEHFEMHDLINDLATMVSSPYCKRHDNEMQLGNLNKIRHLSYDKRMFNHFGELDSLHGLKGFRTLTALPLEFEFWIPGHYLANGVLHELLVALKQLRVLSLSDYRNITVLPNSIGDLKHLRYLDLSCSGIERLPPAICKLYNLQTLLLSYCVALTELPEEMGKLVNLRRLDIDGTDLQDIPVEIARLENLQSLNGFIVSKQQHGLKLAEMRKFPHLQGKLCISKLENVIDLSDACQANLKEKKQIEELSLEWSDSTLEDSHQVVLEHLQPSTNLKKLTVKCYGGTSFPNWLGDSSFGNIVSLWIEDCHHCSSLPPLGRLQSLKKLFILGMKSVKSIGSEFYGGNSPSFQPFPSLETLTFKSMEEWEEWNMIDGITTEFPCLSNLSLRRCPKLKGNLPSNLPCLIRLFVWDCCLLESEFSGEVDNRNIMRRMNVFNFNSLQELYLYEIPSLTAFPSNGLRKALKTLSIEFCKNLEFPSHEFLHSYKALEDLKIMSSCCSLTSFSLGSLPVLKRLNLLDCKELKSISILEEAAARQSLMFLEHLQVEECPELESISLLDLCTPNLSYFEKRVCLSI* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0043 987 SUPERFAMILY RNI-like 756 977 - -
Ahy11g0043 987 Pfam NB-ARC domain 124 325 IPR002182 GO:0043531
Ahy11g0043 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 358 IPR027417 -
Ahy11g0043 987 SMART LRR_typ_2 530 553 IPR003591 -
Ahy11g0043 987 SMART LRR_typ_2 577 600 IPR003591 -
Ahy11g0043 987 CDD AAA 101 242 - -
Ahy11g0043 987 Gene3D - 261 342 IPR042197 -
Ahy11g0043 987 Gene3D Ribonuclease Inhibitor 434 807 IPR032675 -
Ahy11g0043 987 Gene3D - 85 255 IPR027417 -
Ahy11g0043 987 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Ahy11g0043 987 Coils Coil 50 70 - -
Ahy11g0043 987 Gene3D - 343 429 IPR036388 -
Ahy11g0043 987 Gene3D Ribonuclease Inhibitor 808 984 IPR032675 -
Ahy11g0043 987 PRINTS Disease resistance protein signature 504 520 - -
Ahy11g0043 987 PRINTS Disease resistance protein signature 200 214 - -
Ahy11g0043 987 PRINTS Disease resistance protein signature 297 311 - -
Ahy11g0043 987 PRINTS Disease resistance protein signature 127 142 - -
Ahy11g0043 987 PANTHER OS05G0414200 PROTEIN 10 966 - -
Ahy11g0043 987 PANTHER DISEASE RESISTANCE PROTEIN RP 10 966 IPR044974 GO:0006952
Ahy11g0043 987 SUPERFAMILY L domain-like 419 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0043 Ahy-Chr11 456127 461385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0043 125 749 WRKY Transcription Factor Family AT5G45050 23.486 4.03e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0043 - - ahf:112719656 1457.2