Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0029 ATGGCTACTACCAAGTTCAGACATGTCTTTGGTAGATTATGGGGTTTTGCTACTTCTTGTAAGAAAAATAGTAGCACCCCAATTGGCTCAAGAATTCTCCAAAGGGATGTGGAAAAGGAAGAATTTCAGTATGCTAGTACTCTGTGCCTATCAAAATACTATAGTGTCTTTGTGGTTCGTCTTGCAATCATGGTTATGCTAGCTATCTTGATTGGTCTTCTTACTATACTAACATGGCATTTCACAAAGATTTATACAACAAAATCTCTTAATAGCTTAGCCTATGACTTGCGTTATGAGCTTCTACAACGCCCAATCTTGAGGATGTGGAACATTTTGAATTCTACTTCTGAAATTACAATGGCTCAGGTCAAGCTTTCTCAGTATGTGATTAGAAGCCATGGCAATCTTACCACTCAAGAAAACCAAGTTGAGATGTATGAAGCAATGAGAGCAGTAACATGGGCACTTTTTGCTAGTAGAAAAGCTCTTAACTCAATCACTGTCAAATACAATAATGGTTTTGTTCAAGCATTCCATAGAGACCTTAAAGATAACAACACATTCTATATTTACTCTGATCTTGCAAATTATTCCATTGGTGCAAGTGCAAGTAGCTCTAACAGTGACATTAATTATTCATCACTTTCTTCTCAAGAATCTTGGAATGATCATGATAACAAGTCTGCTGTATGGTATCGCCAGCCATTGGATCCTGTCACCGGCGAAAAGATTGGAAAAGCAATGCAGATTGCCCCAGAAGACTCAATCCACATAGCAGGCCTATCCCAAGTCCCTGATGGGGTGGCTTCATGGCGTGTCGTCGTGAGCAAGTTCACAGATTCGCCTTTGCTTTCGGCTGCATTGCCTGTTTGGGATCCTTCTAACAAGAGTATTGTGGCTGTGGTGGGAGTAACAACTGCACTTTATAGTGTAGGACAGTTAATGAAGGAGCTTGTTGAGTTGCATAGTGGACATATGTATTTAACTTCTCTAGAAGGTTACTTGCTTGCAACTTCCACTGATGCACCTCTTCTTACAAATTCAACAAAGCCTCCTAAGCTTAAGATGGCTGTAGATTGTGAAGATGAAGTGATAAGGCTTGGAGCTGAGTATTTGAAGAAAAGTTCTGGTAACAAATTCCCTCCTAGCCATGAGGTTCATGTCGCGAATGTCAGGCTAGGCCACGACAGATATTACATCGATTCGTTCTTCCTAAACTTGAAGAGACTTCCTATGGTTGGTGTAATAATCATTCCAAGAAAGCATATATTAGGCCAGGAAGATAAAAGAGCCTTCAAGACTTTGGTTATTCTGATATCTGCATCAATGTGTATTATAGTCATTGGATGGGTTTGCATTTTGATTTTGACAAATGGAGTCTCAAAAGAAATGAAACTAAGAGCAGAACTTATTAGTCAGCTTGAAGCTAGAAGAAAGGCAGAGGCATCAAGCAACTATAAGAGCCAATTTCTTGCAAACATGAGCCATGAATTGAGGACACCTATGGCTGCAATAATTGGCCTACTCGACATTCTTATGTCCGACGACTGTCTAACCAACGAGCAGTGTGCAACGGTTACTCAGATAAGAAAATGCTCGACTGCGCTGCTCCGGCTTCTTAATAACATCTTGGATCTCAGCAAGGTGGAATCAGGAAAGCTAGTTCTAGAAGATGCTGAATTCGACTTGGGAAGGGAACTTGAAGGACTAGTGGATATGTTTTCAGTGCAATGCATGAATCACAGTGTAGAGACTGTCTTAGACCTATCTGATGATATGCCGAAGCTAGTTCGCGGCGACTCTGCTAGAGTAGTCCAAATTTTTGCAAATTTGATCAACAACTCAATTAAATTTACTCCTTCTGGTCACATTATTCTGAGAGGATGGTTTGAGAATCCAAATCCATGTAGTGATAATGCAAATTATCTTATGGAAGAGAAGAATTTACAATGTGCACAAAAGACTAGAGCAAGGCAACATGAGAACCATGCAAAGAGGACTTCTAAGAGGGATAACAAAGCAATCCTATGGTTTGAAGTTGATGACACCGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCAGATCCCTCAACTACTAGACTGCATGGAGGTACTGGCCTTGGTCTTTGCATTGTCAGAAGCTTGGTTAATAAGATGGGTGGAGAAATCAAAGTTGTCAAAAAGGAAGGTCCCGGAACACTGATGAGATTATACCTGCGCCTCGATACGGCCGGGGATGACACAGAACAACATTGTTTGGTAGATATTGCAAACAATGGCTTAGTGGTATTGCTTGCACTGCACGGCAACATGGGAAGATCAATCACATCTAAGTGGCTGCAGAAAAATGGGGTGTTCACAATGGAAGCATCTGAATGGAATGGATTAACACAAATTCTAAGGGAACTCTTTCATACAAGGAATTCAGCAGGAATTAACAATGACTTTGATTTACACTATCCAATACATGAGAGTTTGAAGTCCAAGTTACTTAGCATACAAGAAATCAAGAATCCAGTTTTTGTCATCGCAGTCGACATAGGACTACTCGATTTGAGCACAGATATATGGAAGGAGCAGCTTAACTTTCTTCACAGATATGTGGGGAGGGCGAAATTTATATGGGTTCTAAACCATGACACCTCTAACACCATTAAAATGGAGCTTAGAAGAAAAGGATATATGATGACAGTTAACAAACCACTTTACAAAGCAAAAATTGTTCACATTTTGGAGGAAGTTGTAAAAGAGAGAAATCATGAGATGCAAAAGAAGAACATGGATGAGCTTCATGAGAGTGATTATACTCATTGTGATGCTGCTAGCTCGGACGATTCGGACATATCCGAATCAGGTCCTTGTAATCCTGTTAGTAGTACTAATCATGAAAAAAAAAGTGAGAAGGTTGAGCAGTTTCATAGATTATCACTGTATAGGATTAACAACTGCTTAATAGGATTAACAGATGAACATTCAGAAGCTAATAATACTCCAAAGAAGGAAGAGTTATGTCAAAATAACCAAAACTCTCCAAAATCATTGTCTCCAGAACAAGACTATTTTCCAAGAGAAGCTCATCAAGGTGAAGATTCTGAGAGCAGAGGCAAAGAAGAGCATAGGATCATCGGCGGCTCGGCTAGGCCGGTAAATGGAAAGAAATCTCTTGAAGGGTTAAGGATATTGCTTGCAGAAGACACACCTGTGATTCAAAGAGTTGCAACCATAATGCTTGAGAAGATGGGAGCAAGTGTTGTAGCAGTTGGTGATGGACAAGCAGCAGTGGATGCTTTGAATGGCTTGCTTGGTGTTGAAGATTTTAGAAGAGACTCAAACTTGAATGAAAGGAACACAAGATCATCATCTTCTCAAACTGAAATTCTCAGTTTCCCTTCATATGACTTGGTCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAAGCAACAAAAGCAATAAGAAAATCAGAAGTGGGAAGTGGAGTTCACATTCCAATAGTTGCTCTCACTGCTCATGCAATGTCATGTGATGAAGCCAAATGCTTAGAAGTTGGAATGGATGCTTATTTAACCAAACCAATTGACTTCAAATTGATGGAATCCACTATTCTTTCTCTCACAAGAAGAACAATATCCTAA 3666 0.3991 MATTKFRHVFGRLWGFATSCKKNSSTPIGSRILQRDVEKEEFQYASTLCLSKYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTSEITMAQVKLSQYVIRSHGNLTTQENQVEMYEAMRAVTWALFASRKALNSITVKYNNGFVQAFHRDLKDNNTFYIYSDLANYSIGASASSSNSDINYSSLSSQESWNDHDNKSAVWYRQPLDPVTGEKIGKAMQIAPEDSIHIAGLSQVPDGVASWRVVVSKFTDSPLLSAALPVWDPSNKSIVAVVGVTTALYSVGQLMKELVELHSGHMYLTSLEGYLLATSTDAPLLTNSTKPPKLKMAVDCEDEVIRLGAEYLKKSSGNKFPPSHEVHVANVRLGHDRYYIDSFFLNLKRLPMVGVIIIPRKHILGQEDKRAFKTLVILISASMCIIVIGWVCILILTNGVSKEMKLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAIIGLLDILMSDDCLTNEQCATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCMNHSVETVLDLSDDMPKLVRGDSARVVQIFANLINNSIKFTPSGHIILRGWFENPNPCSDNANYLMEEKNLQCAQKTRARQHENHAKRTSKRDNKAILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRSLVNKMGGEIKVVKKEGPGTLMRLYLRLDTAGDDTEQHCLVDIANNGLVVLLALHGNMGRSITSKWLQKNGVFTMEASEWNGLTQILRELFHTRNSAGINNDFDLHYPIHESLKSKLLSIQEIKNPVFVIAVDIGLLDLSTDIWKEQLNFLHRYVGRAKFIWVLNHDTSNTIKMELRRKGYMMTVNKPLYKAKIVHILEEVVKERNHEMQKKNMDELHESDYTHCDAASSDDSDISESGPCNPVSSTNHEKKSEKVEQFHRLSLYRINNCLIGLTDEHSEANNTPKKEELCQNNQNSPKSLSPEQDYFPREAHQGEDSESRGKEEHRIIGGSARPVNGKKSLEGLRILLAEDTPVIQRVATIMLEKMGASVVAVGDGQAAVDALNGLLGVEDFRRDSNLNERNTRSSSSQTEILSFPSYDLVLMDCQMPKMDGYEATKAIRKSEVGSGVHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTRRTIS* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0029 1221 MobiDBLite consensus disorder prediction 946 977 - -
Ahy11g0029 1221 Gene3D - 552 755 IPR036890 -
Ahy11g0029 1221 SUPERFAMILY CheY-like 1065 1217 IPR011006 -
Ahy11g0029 1221 PRINTS Bacterial sensor protein C-terminal signature 736 749 IPR004358 GO:0016310|GO:0016772
Ahy11g0029 1221 PRINTS Bacterial sensor protein C-terminal signature 712 730 IPR004358 GO:0016310|GO:0016772
Ahy11g0029 1221 PRINTS Bacterial sensor protein C-terminal signature 677 691 IPR004358 GO:0016310|GO:0016772
Ahy11g0029 1221 PRINTS Bacterial sensor protein C-terminal signature 695 705 IPR004358 GO:0016310|GO:0016772
Ahy11g0029 1221 ProSiteProfiles Response regulatory domain profile. 1068 1216 IPR001789 GO:0000160
Ahy11g0029 1221 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 475 554 IPR036097 GO:0000155|GO:0007165
Ahy11g0029 1221 SMART HisKA_10 487 553 IPR003661 GO:0000155|GO:0007165
Ahy11g0029 1221 ProSiteProfiles Histidine kinase domain profile. 494 752 IPR005467 -
Ahy11g0029 1221 Gene3D - 1052 1215 - -
Ahy11g0029 1221 PANTHER TWO-COMPONENT HISTIDINE KINASE 3 1217 - -
Ahy11g0029 1221 SMART HKATPase_4 600 752 IPR003594 -
Ahy11g0029 1221 PANTHER OSMOSENSOR HISTIDINE KINASE 3 1217 - -
Ahy11g0029 1221 CDD REC_hyHK_CKI1_RcsC-like 1069 1212 - -
Ahy11g0029 1221 CDD HisKA 488 549 IPR003661 GO:0000155|GO:0007165
Ahy11g0029 1221 Pfam Response regulator receiver domain 1069 1209 IPR001789 GO:0000160
Ahy11g0029 1221 Gene3D - 456 551 - -
Ahy11g0029 1221 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 542 749 IPR036890 -
Ahy11g0029 1221 MobiDBLite consensus disorder prediction 1008 1025 - -
Ahy11g0029 1221 MobiDBLite consensus disorder prediction 1002 1057 - -
Ahy11g0029 1221 Pfam His Kinase A (phospho-acceptor) domain 488 553 IPR003661 GO:0000155|GO:0007165
Ahy11g0029 1221 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 600 751 IPR003594 -
Ahy11g0029 1221 SMART REC_2 1067 1212 IPR001789 GO:0000160
Ahy11g0029 1221 MobiDBLite consensus disorder prediction 1031 1052 - -
Ahy11g0029 1221 MobiDBLite consensus disorder prediction 954 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0029 Ahy-Chr11 287284 294291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0029 5 1217 Histidine Kinase Gene Family AT2G17820 63.008 0.0 1505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy11g0029 HATPase_c 1.60E-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0029 - - gmx:100801970 1852.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0029 11 287284 294291 Ahy1g0759 1 11400086 11406978 hybridization