Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0020 ATGGCACCATTTTTATTGCATGGAGATATCAATGCAACCATTTATGAGACTCAAAAGTTCGACACCTTTTCATCGGTGCCCCTTTATGCAAGCATTTATCTGGATGAAGTAAAGATTGAAAGCAGGCGTTTAAAAGAGCCTACTAACCCTAAATTGGAAGAGTGTTTTTACATTCGTTGTGCCCATATGACATCAAATATCATAGTCAAATTGGAATGTGACAAATGGCTTTCTTCTCTTCGTGGACGAGGTGTTATTGGAGAAGCATATGTGGAAGTTGATGAGAAAATGTTAAATGGTGTTGAAGTTGACAAATGGGTTGAAATAGTTGATGCCAGTAAAAAGCCCATATCTGGGGGCCCAAAGATCCATGTCAAGCTACAATTTTTTGATGCTAAACGACACCAAAACTGGTCTCAAGGCATCAAATCTCCTGACTTCCCTGGAGTTCCTCGCACTTTCTTCTCCCAGCATAAGGGATGCAAGGTTACTCTTTACCAAGATGCTCATGTCCTAGATGATTTTTCCCCAAGAGTAGTGCTTGATGGAAGTAAGACTTACGAGCCTCAAAGATGCTGGGAGGATATCTTTGATGCAATCAACGAAGCAAAACACTTTATATACATCACTGGCTGGTCTCTTTACACTCAGATTTCTCTGATAAGAGATCCTAAGAGGCCAAAGCATGGTGGAGACATAACACTCGGTGAGTTGCTCAAGAAAAAGGCAAAGGACGATGGAGTCAGGGTTGTGATGCTTCTATGGCAGGAAGGAATAATTCGAGTTCCAGGAATTGGAAACTACGTCAGAACCATGGGTACTCATGATAAAGAAACCCAAAGCTATTTCAAGGACACAAATGTCCACTGCATTTTGTGCCCACGTGACAGTGTTTCTTACAGTCATCACCAAAAGATTGTGGTGGTGGATGCTAAGTTGCCAAATGAAAAGGACCCAGATCATCAAAGAAGAATTGTGAGTTTCATTGGAGGTATTGATCTCTGTAATGGAAGATATGATACTCAATTTCATTCTCTTTTTCAAACTTTAGCTGCTGAACACAGTAAAGATTTTTATCAACCAAGTATTTATGGATCTGCAATTGAAAAGGGTGGTCCTAGGGAGCCATGGCATGATATACATTGTAAGCTTGAAGGGCCTATTGCATGGGATGTTTACTCCACCTTTGTGCAGAGATTTTGGAAACAGGGCACAGATCAGGACATGCTTCTTTCAGAAGAAAAGCTTAAGGATTTCATCATTCCACCATCTCAAGCAACGAACCCTGATGATGATGATGACACATGGAATGTTCAGTTGTTCAGATCCATTGATGATACAGCTACTCTTGGTTTTCCAGAAACTGCTAAAGAAGCTTTTGAACATGGGCTTGTTAGCGGGAAGAACAAGACGATAGATCGGAGCATTCAAGATGCATACATTAATGCTATTCGCCGAGCAAAGAATTTCATATATATTGAGAACCAATATTTTATAGGAAGTGCTTTCGGGTGGAGTGTGGATAGCACAGAATTTGATGCTGTTCATCTTATCCCAAAGGAGCTTTCACTCAAAATTGTTAGCAAGATTAAGGCTAAAGAGAAGTTCATGGTGTATGTAGTGATTCCAATGTGGCCAGAAGGTGTTCCAATAAATAAGACTACTGGAGCTGTTCAGAAAATACTATATTTGCAGAGGAGGACCATAGAGATGATGTACAAGGACATTGTTGAAGCACTCAAGGAAGAGAAAATTGAACAAGATCCTCGAAAATATTTGTCATTCTTCTGTCTTGGCAATCGAGAGGTGAAGAAAGACGGAGAGTATATGCCTCCACAGAGACCAGAACAAGGTTCCGATTACCAGAAAGCCCAAGAAGAACGACGCTTCATGATTTATGTGCACTCCAAGATGATGATAGTTGATGATGAGTACATAATCATTGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGGAAGAGACACCGAAATTGCCATGGGAGCTTATCAACCACACCATTTGGCTACTAGCCAAGGAGGTGCAAGAGGCCAAATCCATGGCTTCCGCATCTCCCTGTGGTACGAGCACCTTGGAATGTATGAAGACACCTTCCTCAACCCAGAAAGTGAAGAATGTATTAACAAAGTGAAACAACTTGGGGAGAAGTATTGGGAGTTGTATTCTAACAAGTATTTACTTGGATCCAATAACCTTCCTGGTCACTTGCTTCGGTATCCTGTTGATATTTCTGCTGATGGAACACTCACAAATCTCTCAGGAGTTGAGTTCTTCCCTGACACTAATGCTCCTATTCTAGGTGCCAAAAACCCTACTGTCATAAATCGAGGTCTTCCTAACAAGATATTCACCATGTAG 2382 0.411 MAPFLLHGDINATIYETQKFDTFSSVPLYASIYLDEVKIESRRLKEPTNPKLEECFYIRCAHMTSNIIVKLECDKWLSSLRGRGVIGEAYVEVDEKMLNGVEVDKWVEIVDASKKPISGGPKIHVKLQFFDAKRHQNWSQGIKSPDFPGVPRTFFSQHKGCKVTLYQDAHVLDDFSPRVVLDGSKTYEPQRCWEDIFDAINEAKHFIYITGWSLYTQISLIRDPKRPKHGGDITLGELLKKKAKDDGVRVVMLLWQEGIIRVPGIGNYVRTMGTHDKETQSYFKDTNVHCILCPRDSVSYSHHQKIVVVDAKLPNEKDPDHQRRIVSFIGGIDLCNGRYDTQFHSLFQTLAAEHSKDFYQPSIYGSAIEKGGPREPWHDIHCKLEGPIAWDVYSTFVQRFWKQGTDQDMLLSEEKLKDFIIPPSQATNPDDDDDTWNVQLFRSIDDTATLGFPETAKEAFEHGLVSGKNKTIDRSIQDAYINAIRRAKNFIYIENQYFIGSAFGWSVDSTEFDAVHLIPKELSLKIVSKIKAKEKFMVYVVIPMWPEGVPINKTTGAVQKILYLQRRTIEMMYKDIVEALKEEKIEQDPRKYLSFFCLGNREVKKDGEYMPPQRPEQGSDYQKAQEERRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPHHLATSQGGARGQIHGFRISLWYEHLGMYEDTFLNPESEECINKVKQLGEKYWELYSNKYLLGSNNLPGHLLRYPVDISADGTLTNLSGVEFFPDTNAPILGAKNPTVINRGLPNKIFTM* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0020 793 PANTHER PHOSPHOLIPASE D ALPHA 3 23 780 - -
Ahy11g0020 793 Pfam Phospholipase D Active site motif 300 338 IPR001736 GO:0003824
Ahy11g0020 793 Pfam Phospholipase D Active site motif 631 657 IPR001736 GO:0003824
Ahy11g0020 793 Gene3D Endonuclease Chain A 180 425 - -
Ahy11g0020 793 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 298 338 IPR001736 GO:0003824
Ahy11g0020 793 PANTHER PHOSPHOLIPASE D 23 780 IPR015679 -
Ahy11g0020 793 SMART pld_4 298 338 IPR001736 GO:0003824
Ahy11g0020 793 SMART pld_4 630 657 IPR001736 GO:0003824
Ahy11g0020 793 Pfam Phospholipase D C terminal 703 777 IPR024632 -
Ahy11g0020 793 Gene3D Endonuclease Chain A 435 679 - -
Ahy11g0020 793 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 630 657 IPR001736 GO:0003824
Ahy11g0020 793 SUPERFAMILY Phospholipase D/nuclease 133 408 - -
Ahy11g0020 793 SUPERFAMILY Phospholipase D/nuclease 464 715 - -
Ahy11g0020 793 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 19 130 IPR035892 -
Ahy11g0020 793 PIRSF PLD_plant 5 785 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0020 Ahy-Chr11 209187 215402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0020 1 778 Phospholipase D Gene Family (Wang group) AT3G15730 57.543 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0020 K01115 - gmx:100786410 958.362