Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0004 ATGGTTGATGAATATAGAAGTATGGTGGAGAACCCATCACCAATGGGAAACGCAACAAATCACATGATGCTGGGATTTCTTGCTGGAATTTCGACAGTTATGTTAGTTGCTGTCATATTGTTCTGCCTCTTTGGAACAAAGCTCACTGCACTTTTCAAACAACATAGGACTTTGAAAGGTAAAGAGTACAAAAGCTTCAAAGATGAAACAATGCCGCTAAGGCGTTTTACCTTTGATGAAATAGAGAGAGCTACCAAGAACTTTAGCCAAGAATTCTTACTTGGTTCTGGTGCATTTGGAAATGTTTACAAAGGAAATTTTGAATTAGAAGGAACTTTAGCCATTAAGAGAGCTCACGGTGAATCCTTCTTAAGCGTCGATGAATTCCGAAATGGTAAATTTGGGGCAAGAATTCTGGTATATGAATATGTACCAAATGGCTCTCTGCTTGAATATATGATTGGAAACAAGAATAGCTTGACTTGGAAGCAAAGAGTGAACATAGCAATAGGAGCAGCTAGAGGCATAGCTTATTTACATGAAGGAATAAAGCCGAGTATAATTCATCGTGATCTTAAACCAAGTAACATCCTATTAGGGGAAGGTTTCGAGGCTAAGGTCTCGGATTTCGGGTTGGTGAAATCCGGCCCTATCAAGGACCAATCGCATGTGAGTAGCCAAATCAAAGGGACACCAGGGTATCTTGATCCGGCATATTGTTCAAGCTTTCACGTGACAAAATTCACTGATGTTTATAGCTTTGGTGTCATACTTCTTCAACTTGTTTCAGCTAGACCTGCTGTTGATACAAATGAGGTACAAAGCAAGCAACATATAATTGATTGGGCAAGCCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATCATAGATGCAAACTTGCTATGTCAAAGTGAGCCATGCAATATGAGAGTTATGCTGAAGATGGGTCAACTTGCTTTAAGATGTGTGGTTCAAGAACCAAAAAGTAGACCTACAATGATTCAAGTGTGTCAAGAACTAGAACAAGCACTATACTCTGAAGATACCTTCAACAACAAGCAACATTCTTCAAAGGGTTTCCCTAAATCAATTGGATTGTCTCAGCAATCATCAGTGGAAAAGAATGATAGCTTTGTGAGCATAGATGGTGTTGGACTTCAGAAATTCCATATTGATATGGATAGCTTATCATTTCAGAGCACAAGGTTAATGTGCCTAGAAAATAATAGTATAAGTATTGACATTGATAACAACAACTTGAAGAGAATTCAAGAGGATGGGGACATATAA 1290 0.3853 MVDEYRSMVENPSPMGNATNHMMLGFLAGISTVMLVAVILFCLFGTKLTALFKQHRTLKGKEYKSFKDETMPLRRFTFDEIERATKNFSQEFLLGSGAFGNVYKGNFELEGTLAIKRAHGESFLSVDEFRNGKFGARILVYEYVPNGSLLEYMIGNKNSLTWKQRVNIAIGAARGIAYLHEGIKPSIIHRDLKPSNILLGEGFEAKVSDFGLVKSGPIKDQSHVSSQIKGTPGYLDPAYCSSFHVTKFTDVYSFGVILLQLVSARPAVDTNEVQSKQHIIDWASPSLEKGNVEEIIDANLLCQSEPCNMRVMLKMGQLALRCVVQEPKSRPTMIQVCQELEQALYSEDTFNNKQHSSKGFPKSIGLSQQSSVEKNDSFVSIDGVGLQKFHIDMDSLSFQSTRLMCLENNSISIDIDNNNLKRIQEDGDI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0004 429 Pfam Protein kinase domain 137 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g0004 429 ProSiteProfiles Protein kinase domain profile. 88 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g0004 429 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Ahy11g0004 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Ahy11g0004 429 SUPERFAMILY Protein kinase-like (PK-like) 66 341 IPR011009 -
Ahy11g0004 429 PANTHER OS01G0750732 PROTEIN 19 378 - -
Ahy11g0004 429 Gene3D Phosphorylase Kinase; domain 1 48 134 - -
Ahy11g0004 429 SMART serkin_6 88 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g0004 429 Gene3D Transferase(Phosphotransferase) domain 1 144 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0004 Ahy-Chr11 58802 62508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0004 74 379 Receptor kinase-like Gene Family AT1G30570 39.939 2.30e-64 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Ahy11g0004 Pkinase 1.20E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0004 - - var:108328541 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0004 11 58802 62508 Ahy1g0787 1 11771117 11774670 hybridization