Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy11g0002 | ATGGAGTTTGTGGCAGAAAATCCAAGTCCTTTGTTGGGTTCCTTTGTGGAGAGAGTGAACATGGTTGGTAGCCATGCCCTCTCTGCCATTGTTAGGAACATCTTCTCTGCCATCTTCACCTTCTGCTTTGCATTAGTGGGGACTTTGTTGGGGGCTATGACTGGAGCTTTGATAGGACAAGAGACAGAGAGTGGATTCATTAGAGGAGCTGCCATTGGAGCCATTTCAGGAGCTGTTTTTTCCATTGAAGTTTTTGAATCTTCTCTTGTTCTTTGGCAATCTGATGAATCTGGAATTGGCTGCTTCTTATACTTGCTTGATGTAATTGCAAGCCTATTAAGTGGAAGACTTGTGAGAGAAAGGATTGGTCCAGCAATGTTAAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAGATTAACTTTGATGATGTTCAAAACATATTTGACACTGGTGGTGCAAAAGGCTTATCAAAAGATTCAGTTGAAAAGATCTCAAAGATCATAATTACAAGTGACAACAGTGTTGATGCTTCTGGTGAAAAGGTTTCTTGCTCAGTTTGCCTTCAGGACTTTCAAATTGGAGAAACAGTTAGAAGCTTGCCCCATTGCCATCATATGTTTCACCTACCTTGCATTGACAAGTGGCTCATAAGGCATGGATCTTGCCCTCTATGTAGAAGGGATCTGTAA | 690 | 0.4203 | MEFVAENPSPLLGSFVERVNMVGSHALSAIVRNIFSAIFTFCFALVGTLLGAMTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLVLWQSDESGIGCFLYLLDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEINFDDVQNIFDTGGAKGLSKDSVEKISKIIITSDNSVDASGEKVSCSVCLQDFQIGETVRSLPHCHHMFHLPCIDKWLIRHGSCPLCRRDL* | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy11g0002 | 229 | CDD | RING-H2_PA-TM-RING | 184 | 226 | - | - | |
Ahy11g0002 | 229 | SUPERFAMILY | RING/U-box | 183 | 229 | - | - | |
Ahy11g0002 | 229 | ProSiteProfiles | Zinc finger RING-type profile. | 184 | 226 | IPR001841 | - | |
Ahy11g0002 | 229 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN-RELATED | 13 | 229 | - | - | |
Ahy11g0002 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 144 | 229 | IPR013083 | - | |
Ahy11g0002 | 229 | SMART | ring_2 | 184 | 225 | IPR001841 | - | |
Ahy11g0002 | 229 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 13 | 229 | IPR044523 | - | |
Ahy11g0002 | 229 | Pfam | Ring finger domain | 183 | 226 | IPR001841 | - | |
Ahy11g0002 | 229 | Pfam | YMGG-like Gly-zipper | 43 | 79 | IPR027367 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy11g0002 | Ahy-Chr11 | 37985 | 42116 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy11g0002 | 9 | 229 | C3H Transcription Factor Family | AT5G66070 | 75.566 | 1.32e-116 | 330 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy11g0002 | - | - | gmx:100816939 | 379.022 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g0002 | 11 | 37985 | 42116 | Ahy1g0789 | 1 | 11786479 | 11803984 | hybridization |