Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2726 ATGGCTGCTACTTCTTCATCATCAACACCGTTCTTCCAAATCAGACAAGAGAATCATGAGAATCTGATTTCACAGCAGCAGCAGCAGCTTCTTCAAGCATCATCCACTACAACTTCTGCACCACCACCACCACCACCACTTCCTCAAAAGAAAAGAAGAAACCACGCTGCAGGAACACCATATCCAGATGCAGAGGTGATAGCACTGTCGCCGAAGACGTTAATGGCGACAAACAGGTTCGTATGTGAAGTTTGCAACAAAGGATTCCAAAGAGAACAGAACTTACAGCTTCACAGAAGAGGACACAACCTTCCATGGAAGCTCAAGCAGAAGAACCCTAACAAAGAGCCTAAAAGGAAGGTCTATCTCTGCCCTGAACCCACATGCGTCCACCACCACCCTTCTCGGGCTCTCGGCGACCTCACCGGCATCAAGAAACACTTCTCTCGCAAACACGGCGAGAAGAAGTGGAAGTGTCACAAGTGTTCCAAGAAGTACGCCGTCCAGTCCGACTGGAAGGCGCACTCCAAAACCTGCGGTACCAAAGAGTATAGGTGCGACTGCGGCACCCTCTTCTCCAGGCGTGACAGTTTCATTACTCACAGAGCCTTTTGTGATGCATTAGCACATGAAAATGCATCAAGACACCCTCCTCTAAACCCTTTTGGAAATCTCTATCCCACAAACAACAACAACAACAACAACATCTTGAGTCTTGGAAATAGTACTAGCACTTTCATTGCACCAAAATTTGAGCATTTAATATCACCACCACCGCCGCCACCACCACCATTCAATAACAACAACCACCACCACCACCACCAATCTGCATTATTATTTTCACATCACTCATCATCATCACCATCACCATCACCATCACCATTCTTCATGGAAGGATTTCAAGAACTCCAGCCTCATCATCAACACCAACACCAACACCAACAAGAACCCTTATTATTCTCAACTAATAATAACAACATGAACATGTTCAACCTCAGTTTCTTCCCAAGAAGCAATAATAGCAGTGGTGGTGGAAGTAGCATCATCACCGATCATCATCACCAAATTGGATCAGCTTTTTCTTCTTCTTCATCTTCAATCTTCGGCAACAATAATTCATCACTCCAACAACAACAACAACAAGAGAACAACAACAACAACAACGACAACAACATGTGTTCTCCACACATGTCTGCAACTGCACTGCTCCAGAAAGCTGCACAAATGGGTTCAACAACTTCAACCACCAATAACAGTAACCACAGTGCTTCTTCTCTACTAAGAGCAATGGCCAATAATAACAACAACCACCACCACCACCTCAATGCTGACGTGGACAATGATGAACACAACGACAATCTTCGCGGATTGATGAACTCTTTGGCAAATGAAAACATTTCTTCTTCCATATTCGGCAACGTGAAAGAGAATGCCAACAACCACAATAATAACAATCTTGCTGGTGTGTGCTTTGGAGGATCTGATGATAAGTTGACGTTAGATTTTCTTGGTGTTGGAGGAGTTATCAGAAACATCACTGGGATCAGTACTACTTCTTTCGACCCAACAATGCAATGA 1578 0.443 MAATSSSSTPFFQIRQENHENLISQQQQQLLQASSTTTSAPPPPPPLPQKKRRNHAAGTPYPDAEVIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPNKEPKRKVYLCPEPTCVHHHPSRALGDLTGIKKHFSRKHGEKKWKCHKCSKKYAVQSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAHENASRHPPLNPFGNLYPTNNNNNNNILSLGNSTSTFIAPKFEHLISPPPPPPPPFNNNNHHHHHQSALLFSHHSSSSPSPSPSPFFMEGFQELQPHHQHQHQHQQEPLLFSTNNNNMNMFNLSFFPRSNNSSGGGSSIITDHHHQIGSAFSSSSSSIFGNNNSSLQQQQQQENNNNNNDNNMCSPHMSATALLQKAAQMGSTTSTTNNSNHSASSLLRAMANNNNNHHHHLNADVDNDEHNDNLRGLMNSLANENISSSIFGNVKENANNHNNNNLAGVCFGGSDDKLTLDFLGVGGVIRNITGISTTSFDPTMQ* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2726 525 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Ahy10g2726 525 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 3 514 - -
Ahy10g2726 525 MobiDBLite consensus disorder prediction 1 37 - -
Ahy10g2726 525 SMART c2h2final6 122 152 IPR013087 -
Ahy10g2726 525 SMART c2h2final6 80 102 IPR013087 -
Ahy10g2726 525 SMART c2h2final6 157 177 IPR013087 -
Ahy10g2726 525 MobiDBLite consensus disorder prediction 1 58 - -
Ahy10g2726 525 MobiDBLite consensus disorder prediction 255 298 - -
Ahy10g2726 525 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 3 514 - -
Ahy10g2726 525 SUPERFAMILY beta-beta-alpha zinc fingers 79 177 IPR036236 -
Ahy10g2726 525 MobiDBLite consensus disorder prediction 268 294 - -
Ahy10g2726 525 Pfam Zinc-finger double-stranded RNA-binding 80 102 IPR022755 -
Ahy10g2726 525 MobiDBLite consensus disorder prediction 358 395 - -
Ahy10g2726 525 Gene3D Classic Zinc Finger 63 121 - -
Ahy10g2726 525 Gene3D Classic Zinc Finger 122 205 - -
Ahy10g2726 525 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 102 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2726 Ahy-Chr10 116482839 116486927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2726 1 217 IDZ Gene Family AT2G02070 73.973 1.11e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy10g2726 zf-C2H2_jaz 6.50E-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2726 K25870 - gmx:102663407 426.402