Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2723 ATGGAACTCTTGTGGAAGCTACCAAACAAGTTTAGTAAGAAGTATGGTAATGGTTTTCCGAATCCAGTGTATCTGAAGCCTGCAGATGACACTGAATGGAGAATAGATTGGACTAATCAAGATGGTGAGATTCAGTTTGAAAAGGGCTGGAGAGAGTTTGCTGCATATTACTCTCTCGAAAATGGCCATTTGTTGTGGTTTGAGTACAATGGAACTTCTAAAATGGAAGTACAAATATTCGACATGAGTTGCCTTGAGATAGAGTATCCTTCCAAGGACCTCATCAATGATGGTAACTTGGCTGGGATCTTGAATGAACAGCCGCAGCCGAAGAAAAAGGCGAATGCAGCACCGAAGCCATCATCTCCTTCTAGAGGTAAAAGAGTGAAATTTGCTGTTGAAACTATAGATTTGGAAGATAGTGAAGAAGATAACCAATTGGATAGCCAATCCGAAGAGACACAGCTTAAGAAATTGCCATATGTGAATGATTTCTATCCTGGGACCAGTGGGTTTCAAGCTCTGAATGAAGCACTGAAATTCAAATCAGAAAATCCCTTTTTCATAGTCAAGGCAAGGCAAAGCAATGTATCAAGACCAACAGTTAATTTCCAAGCTTCCTTTTTCAGAAAGTATTTTGAAAAGGAGCAGAATGTACAGATAAGGTTTCAGAAGATATTGATTCCTGCAAAGCTGCGCTGTTATCCATATAATTCTCAGGCCATTATCTCTTCCGGTTGGGGTCTTTTCGTTCGAACAAGTACACTACAACCTGGGGATGTTACTATTTTTGAGCTCATCGAAAGAGAAGATCCAGTGCTTGATGTTCATATTTATAGAGCCCAAGCTTTCCAGCCTCAGAGCTCTGGGATTCAATCTCAGAAAGAAGCTAAGAAGTCCAAAAGTCCAAAAGAATCTAAGAACTCCGAGGCACAAAATCCCTCTTTCGTGATCAAGATAACAGAAAGTGATCTATCAAAATCAAGGGCTAAAGTGCCAGTTTCCTTCTTCAACAAGTATTTCAAAAAGAAGGAGCCATATGTAGTGATAAGATTTGATAGCAAGTTGTGGCCTGCAAAGTTGCTGTGTTATCCGGGTAGTGCCTATATCTCCTGCGGTTGGCTGGATTTCACTCTTGACAATAATTTAAAAGCTGGAGATGTTTGTATCCTTGAGCTCGTCAATGAAAAAGATGCATTGCTCGAATGTCGAATTTATAGAGCAGATGGTTAA 1233 0.4006 MELLWKLPNKFSKKYGNGFPNPVYLKPADDTEWRIDWTNQDGEIQFEKGWREFAAYYSLENGHLLWFEYNGTSKMEVQIFDMSCLEIEYPSKDLINDGNLAGILNEQPQPKKKANAAPKPSSPSRGKRVKFAVETIDLEDSEEDNQLDSQSEETQLKKLPYVNDFYPGTSGFQALNEALKFKSENPFFIVKARQSNVSRPTVNFQASFFRKYFEKEQNVQIRFQKILIPAKLRCYPYNSQAIISSGWGLFVRTSTLQPGDVTIFELIEREDPVLDVHIYRAQAFQPQSSGIQSQKEAKKSKSPKESKNSEAQNPSFVIKITESDLSKSRAKVPVSFFNKYFKKKEPYVVIRFDSKLWPAKLLCYPGSAYISCGWLDFTLDNNLKAGDVCILELVNEKDALLECRIYRADG* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2723 410 Gene3D - 171 284 IPR015300 -
Ahy10g2723 410 Gene3D - 293 409 IPR015300 -
Ahy10g2723 410 SMART B3_2 316 409 IPR003340 GO:0003677
Ahy10g2723 410 SMART B3_2 187 282 IPR003340 GO:0003677
Ahy10g2723 410 SMART B3_2 4 83 IPR003340 GO:0003677
Ahy10g2723 410 CDD B3_DNA 186 280 IPR003340 GO:0003677
Ahy10g2723 410 SUPERFAMILY DNA-binding pseudobarrel domain 181 281 IPR015300 -
Ahy10g2723 410 Pfam B3 DNA binding domain 7 81 IPR003340 GO:0003677
Ahy10g2723 410 Pfam B3 DNA binding domain 318 408 IPR003340 GO:0003677
Ahy10g2723 410 PANTHER B3 DOMAIN-CONTAINING 295 408 - -
Ahy10g2723 410 CDD B3_DNA 314 407 IPR003340 GO:0003677
Ahy10g2723 410 Gene3D - 4 84 IPR015300 -
Ahy10g2723 410 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 295 408 - -
Ahy10g2723 410 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 281 - -
Ahy10g2723 410 MobiDBLite consensus disorder prediction 287 311 - -
Ahy10g2723 410 ProSiteProfiles B3 DNA-binding domain profile. 243 282 IPR003340 GO:0003677
Ahy10g2723 410 SUPERFAMILY DNA-binding pseudobarrel domain 6 90 IPR015300 -
Ahy10g2723 410 ProSiteProfiles B3 DNA-binding domain profile. 315 409 IPR003340 GO:0003677
Ahy10g2723 410 PANTHER B3 DOMAIN-CONTAINING 6 281 - -
Ahy10g2723 410 ProSiteProfiles B3 DNA-binding domain profile. 1 83 IPR003340 GO:0003677
Ahy10g2723 410 MobiDBLite consensus disorder prediction 101 127 - -
Ahy10g2723 410 CDD B3_DNA 7 81 IPR003340 GO:0003677
Ahy10g2723 410 SUPERFAMILY DNA-binding pseudobarrel domain 310 407 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2723 Ahy-Chr10 116438490 116445215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2723 280 409 B3 DNA Binding Superfamily AT3G18990 28.244 9.06e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2723 B3 3.80E-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2723 - - adu:107471605 781.941