Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2722 ATGGCTTCAACTAGCTTCCAACCAAAGAACAAGTCTCCTTCCACTGTGATCAGCTTCTTCAAGATTCTTCTCAGTAAAAGTCTCCAAGCTGGAACTCTTAAGATACCAAGAAAGTTCAGTAGGATATATGGTGGTGGTGTGCCGAATCCAGTGTATCTTAAGCTTCCAGACGGCACTCAATGGAAAATAGATTGGACTAATCATAATGGTGAGATTATATTTGAAAATGGTTGGAAAGAGTTTGCTGCATATTACTCTCTAGATCAAGGGCACTTGTTGTGGTTTGACTATAAAAAAACTTCTCTTTTTGAGGTTCACATATTTGACATGAGTTGCCTTGAAATAAACTATCCTCCCAATGATCACACTGATGATGATTGTGTTGAGATTTTAAATAAGCCCCCATCACCACTCCGGGGGGGTCTAAGGAAGCGGTCGGTAGCACCATTATCGACTCCTTCTAAAACGAAACGATTGAGAAGTGCTACAAAATCTAGAGATGTCGAAAGAGGTAGCCAATCTAAGGATACAAGCCTTGAAATGCCAGTATTTTCATCTTCCCGGCAAGATTTCCTTGATTTCTCTCCTGGGACCAGTGGGTTTAAGGCTCTGAAAGAAGCTGAGAAGTTCAGCTCTGAAAATCCCTTTTTCATTGTCAAGATAAGGCAAGCTATACGTTCAAACCGTAATTTTCCAGCTTCCTTTTTCATAAAATACTTTAAAAATGAGGTGCAGAAAGTAAAGATAAGGTTTGAGGGGAACTTGTTTCCTGCAAAGTTGCGGTATTATCGACAAAATTCTACTGCCTTTATCTCTTCTGGATGGCTCCAATTTGCTCAAGCAAGTAAATTACAACCTGGGGATGTTACTGTGTTTGAGCTCGTCGATAGAGATGATCCGGTGTTTGAAACTCATATTTATAGAGCCAAAGCTTTCAAGTCATGGTCCTGTGGCTTTCAATCTCTGAAAGCAGCTCGGAATTTCAAGTCAGAAAATCCCTCTTTCATGGTCAAGATCACACAAACAAATCTACCAAGAACAACTGCTGTCATACCAGTTCCCTTCTTCACAAAGTATTTTGCAAGGAAGAAGCCGAATATACAGATAAAGTTGAGAAACAAGTTGTTGCCAGCAAAGTTGCTCTATTATCCATCATCTTCTGCTGCCTATATCTCTGCCGGTTGGCAAGCTTTTGTTGGTGCCAGTAATTTAAAGGCTGGAGATGTTTGTGTCTTTGAGCTTGTCAATGGAAAAGATCGAGTGCTCGATGTTCATATTTATAGAGCCGGTCGTTTGTTAAGCTTTTAG 1308 0.4029 MASTSFQPKNKSPSTVISFFKILLSKSLQAGTLKIPRKFSRIYGGGVPNPVYLKLPDGTQWKIDWTNHNGEIIFENGWKEFAAYYSLDQGHLLWFDYKKTSLFEVHIFDMSCLEINYPPNDHTDDDCVEILNKPPSPLRGGLRKRSVAPLSTPSKTKRLRSATKSRDVERGSQSKDTSLEMPVFSSSRQDFLDFSPGTSGFKALKEAEKFSSENPFFIVKIRQAIRSNRNFPASFFIKYFKNEVQKVKIRFEGNLFPAKLRYYRQNSTAFISSGWLQFAQASKLQPGDVTVFELVDRDDPVFETHIYRAKAFKSWSCGFQSLKAARNFKSENPSFMVKITQTNLPRTTAVIPVPFFTKYFARKKPNIQIKLRNKLLPAKLLYYPSSSAAYISAGWQAFVGASNLKAGDVCVFELVNGKDRVLDVHIYRAGRLLSF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2722 435 SMART B3_2 335 430 IPR003340 GO:0003677
Ahy10g2722 435 SMART B3_2 216 310 IPR003340 GO:0003677
Ahy10g2722 435 SMART B3_2 19 111 IPR003340 GO:0003677
Ahy10g2722 435 MobiDBLite consensus disorder prediction 136 179 - -
Ahy10g2722 435 Pfam B3 DNA binding domain 19 109 IPR003340 GO:0003677
Ahy10g2722 435 Pfam B3 DNA binding domain 338 429 IPR003340 GO:0003677
Ahy10g2722 435 Pfam B3 DNA binding domain 229 309 IPR003340 GO:0003677
Ahy10g2722 435 Gene3D - 199 312 IPR015300 -
Ahy10g2722 435 Gene3D - 319 430 IPR015300 -
Ahy10g2722 435 MobiDBLite consensus disorder prediction 160 174 - -
Ahy10g2722 435 CDD B3_DNA 333 428 IPR003340 GO:0003677
Ahy10g2722 435 PANTHER B3 DOMAIN-CONTAINING 13 309 - -
Ahy10g2722 435 ProSiteProfiles B3 DNA-binding domain profile. 214 310 IPR003340 GO:0003677
Ahy10g2722 435 PANTHER B3 DOMAIN-CONTAINING 320 429 - -
Ahy10g2722 435 SUPERFAMILY DNA-binding pseudobarrel domain 210 310 IPR015300 -
Ahy10g2722 435 CDD B3_DNA 215 308 IPR003340 GO:0003677
Ahy10g2722 435 CDD B3_DNA 18 109 IPR003340 GO:0003677
Ahy10g2722 435 ProSiteProfiles B3 DNA-binding domain profile. 334 430 IPR003340 GO:0003677
Ahy10g2722 435 ProSiteProfiles B3 DNA-binding domain profile. 18 111 IPR003340 GO:0003677
Ahy10g2722 435 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 13 309 - -
Ahy10g2722 435 Gene3D - 13 112 IPR015300 -
Ahy10g2722 435 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 320 429 - -
Ahy10g2722 435 SUPERFAMILY DNA-binding pseudobarrel domain 328 429 IPR015300 -
Ahy10g2722 435 SUPERFAMILY DNA-binding pseudobarrel domain 13 111 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2722 Ahy-Chr10 116433964 116436501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2722 298 433 B3 DNA Binding Superfamily AT3G18990 31.915 1.68e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2722 B3 5.20E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2722 - - adu:107471605 439.499