Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2721 ATGAATCTAATCCATGAAAATGCAACTCATTTCTTTCCAATCAAACACCCCATGAGATATATGCATGATTTGAATGTGAAAAATGCAAAATCAGAAGAAAAGTTTTCCAAAATGGATTGTTCAATGCTCCTTCTTGTGTCCATGCATTTGATCAAGAAATTAGAGAAATTCAGTTTATTAATATCAACTAACCAACAAAAGATGAAAGCTGCACCAACAGCTTCAACAGATGAGAAAGAGAGGCTTCCTTACACTGGGCCCACTAAAGACAGATGTCAGAAGATACCAAACAAGTTCACTAGCAAATATGGTGGTGATGTGAAAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTCAATGGAAAGTACAATGGACTCAGCATGATGATGACATTTTATTTGAAAAGGGTTGGAAAGAATTTGCTGCATATTACTGTCTGGATCATGGTCACTTGTTGCGATTTGAGTTCAATGGAACTTCTTGTTTTGAGGTACACATATTTGACATGAGTGGCCTTGAAATACACTATCCTTTCAATAACCGGATCGACAATGATTCGGTTGAGACTTTGAATGAGCTGCCACCACAATGTTGGGGCAGAGAGCAGAAAAGATTGAAAACACCATTATCATTATCATTGCCTTTTACAAGTAAGCAATTGAGAATTGCCACAGAAACTAGAGATGTGGAAGGAGGCAGTCAATCTGAAGAGAAAAACATTGAGATGCCAATAATTCCATCTGTCATTCATCGTTCGGATGTTTTTGAGCCTGGGACCTGTGGTTTTCGATGCCTGGAAGAAGCTCAGAAGTTCAACTCAGAAAATCCCTCTTTCATGATCAAGCTAGGGAAGAGTAATCTACAGAGATCAAGGGCTAATTTTAAAGCTTCCTTCTACATAAAGTATTTTGAAAACAAGGAGCAGAATGTAGAGATACGGTACCAAGGCAAGTTGTGGCCTGCAAAGTTGCTCTGTTATCCCGCAGCAGCAGCTGCCTATATCTCGAATGGTTGGCGGCCTTTTAGTCTTGAGAATGATTTAAAAGTTGGAGATGTTTGTGTCTTTGAGCTCATTAATGGAGAAATCCCAGTGCTTGATGCTCATATTTATAGAGCCAATGGTTAA 1128 0.391 MNLIHENATHFFPIKHPMRYMHDLNVKNAKSEEKFSKMDCSMLLLVSMHLIKKLEKFSLLISTNQQKMKAAPTASTDEKERLPYTGPTKDRCQKIPNKFTSKYGGDVKNPVYLKPPDGTQWKVQWTQHDDDILFEKGWKEFAAYYCLDHGHLLRFEFNGTSCFEVHIFDMSGLEIHYPFNNRIDNDSVETLNELPPQCWGREQKRLKTPLSLSLPFTSKQLRIATETRDVEGGSQSEEKNIEMPIIPSVIHRSDVFEPGTCGFRCLEEAQKFNSENPSFMIKLGKSNLQRSRANFKASFYIKYFENKEQNVEIRYQGKLWPAKLLCYPAAAAAYISNGWRPFSLENDLKVGDVCVFELINGEIPVLDAHIYRANG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2721 375 CDD B3_DNA 95 169 IPR003340 GO:0003677
Ahy10g2721 375 Gene3D - 263 374 IPR015300 -
Ahy10g2721 375 ProSiteProfiles B3 DNA-binding domain profile. 316 374 IPR003340 GO:0003677
Ahy10g2721 375 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 91 373 - -
Ahy10g2721 375 SUPERFAMILY DNA-binding pseudobarrel domain 94 171 IPR015300 -
Ahy10g2721 375 ProSiteProfiles B3 DNA-binding domain profile. 95 171 IPR003340 GO:0003677
Ahy10g2721 375 SMART B3_2 84 171 IPR003340 GO:0003677
Ahy10g2721 375 SMART B3_2 279 374 IPR003340 GO:0003677
Ahy10g2721 375 PANTHER B3 DOMAIN-CONTAINING 91 373 - -
Ahy10g2721 375 CDD B3_DNA 277 372 IPR003340 GO:0003677
Ahy10g2721 375 Gene3D - 80 172 IPR015300 -
Ahy10g2721 375 SUPERFAMILY DNA-binding pseudobarrel domain 272 374 IPR015300 -
Ahy10g2721 375 Pfam B3 DNA binding domain 287 362 IPR003340 GO:0003677
Ahy10g2721 375 Pfam B3 DNA binding domain 92 169 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2721 Ahy-Chr10 116431231 116434036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2721 81 374 B3 DNA Binding Superfamily AT3G18990 27.463 1.13e-28 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2721 B3 4.00E-09 CL0405