Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2706 ATGGATTCCTCTAACTTTCAAAGAAACAAGAATTCTCTTTCCACTGTGATCCGTTTCTTTAAGATTGTCCTCAGAAAAAGTCTTGACAATGGATATCTTAAAATGCCAAACAAGTTCCGTAGGAAATATGGTGGAGATATGCCAAATCCAGTGAAACTCCTGCCTCCAGATGGCACTGAGTGGAGAATAGATTGGACTAATCGTGATGGTGAGATTTTGTTTGAAAACGGTTGGAAAGAGTTTGCTACATTTTACACCTTGGAGAATGGTCATGTGTTGTGGTTTGAGTACAACGGAACTTCTAACATCAAAGTAAACATATTCGACATGACTGCCCTCGAAATTGATTATCCTTCCAATGGTCGAATCGGTGATGACAACTCGGTTGAGATTTTGGATGAACCGCCGCCACGAAGGGACCGAGGCCGGCCGAAGAAAAAAGTGATAGCAGAACCAAAGCAATCACGTGCTTCTGCAAGCAAAAAAATGAAAAGTGCCATCAAAACTAAAGATAAAGATAAAAATCCCAATACACAAAACTTGAAGCTGCATGTCGAGAATGAAAAAGATGGTCAATCTGAAGAGACAGCAGATCTTAAGCTGCCAATAATTCAACGTGCCAGACCAGATATGGATGGTCTGTTTCATAATCTCATCATTCTTTCATTTTTTGGATTCTACTGA 684 0.3991 MDSSNFQRNKNSLSTVIRFFKIVLRKSLDNGYLKMPNKFRRKYGGDMPNPVKLLPPDGTEWRIDWTNRDGEILFENGWKEFATFYTLENGHVLWFEYNGTSNIKVNIFDMTALEIDYPSNGRIGDDNSVEILDEPPPRRDRGRPKKKVIAEPKQSRASASKKMKSAIKTKDKDKNPNTQNLKLHVENEKDGQSEETADLKLPIIQRARPDMDGLFHNLIILSFFGFY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2706 227 CDD B3_DNA 18 109 IPR003340 GO:0003677
Ahy10g2706 227 MobiDBLite consensus disorder prediction 127 152 - -
Ahy10g2706 227 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 185 - -
Ahy10g2706 227 SUPERFAMILY DNA-binding pseudobarrel domain 17 118 IPR015300 -
Ahy10g2706 227 MobiDBLite consensus disorder prediction 164 195 - -
Ahy10g2706 227 PANTHER B3 DOMAIN-CONTAINING 11 185 - -
Ahy10g2706 227 Pfam B3 DNA binding domain 20 109 IPR003340 GO:0003677
Ahy10g2706 227 MobiDBLite consensus disorder prediction 124 195 - -
Ahy10g2706 227 Gene3D - 13 112 IPR015300 -
Ahy10g2706 227 ProSiteProfiles B3 DNA-binding domain profile. 18 111 IPR003340 GO:0003677
Ahy10g2706 227 SMART B3_2 19 111 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2706 Ahy-Chr10 116299483 116301180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2706 4 131 B3 DNA Binding Superfamily AT4G01580 33.588 4.68e-20 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2706 B3 7.90E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2706 - - adu:110276722 408.683