Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2705 ATGAAGACTTTGTTCATAACATTGCAGAAGTTACCAATAAGCACTGAAAAATATGGTTCTGACCTATCAAACCCATTGTATCTTAAGCCTCCAGATGGTACTGAATGGAGAGTAGAGTGGACTAATCATAATGGTGAAATTTTGTTTAAAAACGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGCCATTTGTTATGGTTTGAGTGCAATATTGGAACATCTCACATGAAAGTAAACATATTTGACATGAATTGCCTCCAAATAGAGTATCCTGCTAATGATCAGATCAAAGAGCAGCTGACAGGCAGGGGTCAGCAGCCGATGAAAAAGCAAGAAGAACAAAAAACTAGAGATATGGATAACAGTCGCAACACCCAAAACATGAGACTTAACGAGGGACCGCAGAAGAAAAGATTGAATGAATCATTGCCAAGAGAAGTCTGGGACCAACCGAGGAAAAAACTAAGAGCACTAGTGTCATCTGGTTCTAAAGATAGACACTTGGAAAATGACACACAAATTAAGGATGTAGAAAGAAGCTTCAATTCGCACGGTATTAAATCTAAAGAAAAAAATCATGAGATGCCAGTGTCTGTCAATCAAAATTCTAATGGTAAAAGGAATAGAAGAAGAAAAGATTATGAATCTCCTGTTATGCCCTGTCCTACAAGACTTGAATCTCTGAAAGAAGCTAAGAAGTTTAAGTGGGAAAAGCCCTCTTTCATCATCAAGATAACGCAACGGTCTCAAACGAGAGCACCATGTTACTTTTCAACTAAATTCTACAGAAAGTATTTTGAAAATAATCCACAAAATGCAAATATAAGGTTTGGAAAGAAGTTGTTCCCTGTTAAATTGATCTATAGGCCATCATCATGTGTTGCCTTTATCTCTGCTGGTTGGAACCTTTTTGCTCGAGCTATTAAATTACAAGCCGGAGATGTTTGTTTGTTTAAGCTCATCAATAGAAAAGATCCGGTGCTTGATGTTCATATTTGTCGTCGACAACGCCGCGAGTCACTTAAACCAGTGACTCATGGGATTCAACTCTTCAAAGAAGTTAAGGAGCTCAACTCACATAATCCCTCTTTTATGGTCAAGATAAGAGACAGTGATCCAAGGAGATCAAGGCCTAACTTATCAGCTATCTTCTACAGAAAGTATTTTAAAAAGAATCAGCAGGATGTAAAGTTACAGTTCGGAAAGGAATCATGGCCTGCTACGATAATCTACAATCCGACGTCGAAAAACAGCTTTATTTCGGCTGGTTGGAGTTCTTTTGCTAGAGCAAGTAAATTAGAAGCTGGAGATGTTTGTGTTTTTGAGCTCATCAATGAAAAAGATCTATTTGATGTTCATATTTGTAGAGCCCAATGCTAG 1389 0.3772 MKTLFITLQKLPISTEKYGSDLSNPLYLKPPDGTEWRVEWTNHNGEILFKNGWKEFVAYYSLDHGHLLWFECNIGTSHMKVNIFDMNCLQIEYPANDQIKEQLTGRGQQPMKKQEEQKTRDMDNSRNTQNMRLNEGPQKKRLNESLPREVWDQPRKKLRALVSSGSKDRHLENDTQIKDVERSFNSHGIKSKEKNHEMPVSVNQNSNGKRNRRRKDYESPVMPCPTRLESLKEAKKFKWEKPSFIIKITQRSQTRAPCYFSTKFYRKYFENNPQNANIRFGKKLFPVKLIYRPSSCVAFISAGWNLFARAIKLQAGDVCLFKLINRKDPVLDVHICRRQRRESLKPVTHGIQLFKEVKELNSHNPSFMVKIRDSDPRRSRPNLSAIFYRKYFKKNQQDVKLQFGKESWPATIIYNPTSKNSFISAGWSSFARASKLEAGDVCVFELINEKDLFDVHICRAQC* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2705 462 ProSiteProfiles B3 DNA-binding domain profile. 285 339 IPR003340 GO:0003677
Ahy10g2705 462 Pfam B3 DNA binding domain 382 460 IPR003340 GO:0003677
Ahy10g2705 462 Pfam B3 DNA binding domain 16 85 IPR003340 GO:0003677
Ahy10g2705 462 Pfam B3 DNA binding domain 254 339 IPR003340 GO:0003677
Ahy10g2705 462 CDD B3_DNA 22 85 IPR003340 GO:0003677
Ahy10g2705 462 PANTHER B3 DOMAIN-CONTAINING 15 337 - -
Ahy10g2705 462 PANTHER B3 DOMAIN-CONTAINING 346 460 - -
Ahy10g2705 462 SMART B3_2 244 339 IPR003340 GO:0003677
Ahy10g2705 462 SMART B3_2 1 87 IPR003340 GO:0003677
Ahy10g2705 462 SMART B3_2 367 461 IPR003340 GO:0003677
Ahy10g2705 462 SUPERFAMILY DNA-binding pseudobarrel domain 238 338 IPR015300 -
Ahy10g2705 462 CDD B3_DNA 242 337 IPR003340 GO:0003677
Ahy10g2705 462 SUPERFAMILY DNA-binding pseudobarrel domain 360 460 IPR015300 -
Ahy10g2705 462 MobiDBLite consensus disorder prediction 188 222 - -
Ahy10g2705 462 MobiDBLite consensus disorder prediction 111 125 - -
Ahy10g2705 462 Gene3D - 226 340 IPR015300 -
Ahy10g2705 462 Gene3D - 351 461 IPR015300 -
Ahy10g2705 462 MobiDBLite consensus disorder prediction 103 144 - -
Ahy10g2705 462 CDD B3_DNA 365 459 IPR003340 GO:0003677
Ahy10g2705 462 Gene3D - 8 88 IPR015300 -
Ahy10g2705 462 SUPERFAMILY DNA-binding pseudobarrel domain 16 94 IPR015300 -
Ahy10g2705 462 ProSiteProfiles B3 DNA-binding domain profile. 366 461 IPR003340 GO:0003677
Ahy10g2705 462 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 337 - -
Ahy10g2705 462 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 346 460 - -
Ahy10g2705 462 ProSiteProfiles B3 DNA-binding domain profile. 1 87 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2705 Ahy-Chr10 116275756 116279222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2705 357 452 B3 DNA Binding Superfamily AT3G18990 31.959 1.19e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2705 B3 1.00E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2705 - - adu:107471893 766.918