Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2703 ATGGATTCCTCTAACTTTCAAAGAAACAAGAATTCTCTGTCTACTGTGATCCGTTTCTTTAAGATTGTTCTCAGAAAAAGTCTTGATGATGGATATCTTAAAATGCCAAACAAGTTCTGTAGGAAATATGGTGGTGATATGCCAAATCCAGTGAAACTCCAGCCTCCAGATGGCACTGAATGGAGAATAGATTGGACTAATCGTGACGCTGAGATTTTGTTTGAAAATGGTTGGAAAGAGTTTGCTACATTTTACACTTTGGAGAATGGTCATGTGTTGTGGTTTGAGTACAACGGAACTTCTAACATCAAAGTAAACATATTCGACATGACTGCCCTCGAAATTGATTATCCTTCCAATGGCCGAATCGGTGATGACAACTCGGTTGAGATTTTGGATAAACCGCCGCCACGAAGGGGCCGAGGCCAGCCGAAGAAAAAAGTGATAACAGAACCAAAGCAATCACGTGCTTCTACAAGCAAAATAATGAAAAGTGCCATCAAAACTAAAGATAAAGATAAAAATCCCAATACACAAAACTTAAAAGATGGTCAATCTGAAGAGACAGCAGATCTTAAGCTGCCAATAATTCAACGTGCCAGACCAGATATGGATGTTATTAGAGAAGCAAAGAAGTTCAAGTCGAAAAATCCTTCTTTTGTCATCAAGATTAAGCAAAAGCAACAAACAGGATCACCGGCAAATCTTCCAGTTTGTTTCTTCAGAATGTACTTCGAGAACACGAAGCAGTATGCAATTCTACGAGTTGGAAAGAAGCAGTGGCATGCAACATTGATCCATTATCCAAATAGGAAGAATGCCCTTATCTCTCATTGGCGCTTGTTCGTTGAAGAAAATAACTTAAAAGCCGGAGATGTTGGTATCTTTGAGCTCGTTAACAGACAAGGTCCAGAACTTAAGGTTCATATTCGTCGAAGCCATGATTAG 948 0.3935 MDSSNFQRNKNSLSTVIRFFKIVLRKSLDDGYLKMPNKFCRKYGGDMPNPVKLQPPDGTEWRIDWTNRDAEILFENGWKEFATFYTLENGHVLWFEYNGTSNIKVNIFDMTALEIDYPSNGRIGDDNSVEILDKPPPRRGRGQPKKKVITEPKQSRASTSKIMKSAIKTKDKDKNPNTQNLKDGQSEETADLKLPIIQRARPDMDVIREAKKFKSKNPSFVIKIKQKQQTGSPANLPVCFFRMYFENTKQYAILRVGKKQWHATLIHYPNRKNALISHWRLFVEENNLKAGDVGIFELVNRQGPELKVHIRRSHD* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2703 315 Gene3D - 201 315 IPR015300 -
Ahy10g2703 315 MobiDBLite consensus disorder prediction 127 152 - -
Ahy10g2703 315 ProSiteProfiles B3 DNA-binding domain profile. 259 314 IPR003340 GO:0003677
Ahy10g2703 315 SMART B3_2 220 314 IPR003340 GO:0003677
Ahy10g2703 315 SMART B3_2 19 111 IPR003340 GO:0003677
Ahy10g2703 315 CDD B3_DNA 236 312 IPR003340 GO:0003677
Ahy10g2703 315 MobiDBLite consensus disorder prediction 124 192 - -
Ahy10g2703 315 CDD B3_DNA 18 109 IPR003340 GO:0003677
Ahy10g2703 315 Gene3D - 14 112 IPR015300 -
Ahy10g2703 315 ProSiteProfiles B3 DNA-binding domain profile. 18 111 IPR003340 GO:0003677
Ahy10g2703 315 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 313 - -
Ahy10g2703 315 Pfam B3 DNA binding domain 236 313 IPR003340 GO:0003677
Ahy10g2703 315 Pfam B3 DNA binding domain 20 109 IPR003340 GO:0003677
Ahy10g2703 315 SUPERFAMILY DNA-binding pseudobarrel domain 17 118 IPR015300 -
Ahy10g2703 315 PANTHER B3 DOMAIN-CONTAINING 11 313 - -
Ahy10g2703 315 SUPERFAMILY DNA-binding pseudobarrel domain 213 313 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2703 Ahy-Chr10 116269433 116301882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2703 19 315 B3 DNA Binding Superfamily AT3G18990 26.190 6.29e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2703 B3 8.20E-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2703 - - aip:107621185 594.734