Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2701 ATGACATCCAAACCAGTCCGTTTCTTCAAGAAACTCCCAAAGAATTTCAGTAGAAAATATGGTGCTTCTTTACCAAAGCCTGTGTTTCTCAAGCCTCCAAATGGAACTGAATGGAAAGTAGATTGGACTATGCATGATGCTGCTGTTGTGTTTGAAAATGGTTGGAAAGAGTTTGTTACATATTACTCTATAGATCATGGGCATGTGTTGAAGTTTGAATATAATGGAAATTCCAAATTGGGGGTTCAAATTTGTGACAAGAGTGGCCTTGAAATAAAGTATCCTTTCAATGTTAATCAACAAGAAAAGGTTAACATTATTGAGATCAGTGATGAAGAAGTTCAAGCGTTCGATGAAATGCCTCAACGACAAAACAATAGAAGGAAATCACCAGAGTCTCAGCTTAACCAAAGGAATGGTAATCAGTCTCAAGGGACAAGTTTTTTGAAGTCAACATCAACATCCATTGAAAAAGAATTAGATGGTGATGAAGAAGATAAAAGTAAGGATGGCATTTCCATTAAAGATAGAAAGGAAACTCAAACAACTTCAAAGGTTACAAGTCCCCTCGCTGAAACAAGTGGTACTCTGAAGGAAGCTGAGAAATTCACCTCAAAAAATCCGTTTTTCATCATAAATGTAACGAAAAAATTTCTGGACCAAAGCAGACCGAATGTACCAATTGACTTTGTCAAAAAGTACCTCAAGCAAAAGCAGTATGCCATGGTAAGGTTTAGAAATAAATTGTGGCCTTTGAAGTTGCTGCCTTATGTAACAAAAAAGGAATCAATCCGGTTGTCCACTGGTTGGAACTTGTTTGCTAAAGCAAGTGAATTGCAAGCTGGAGATGTTTGCATCTTTGAGCTGATCAACATGACAAATTCAGAGTTTGATGTTCACTTCTTTAGATCTCACTCCTAA 921 0.3692 MTSKPVRFFKKLPKNFSRKYGASLPKPVFLKPPNGTEWKVDWTMHDAAVVFENGWKEFVTYYSIDHGHVLKFEYNGNSKLGVQICDKSGLEIKYPFNVNQQEKVNIIEISDEEVQAFDEMPQRQNNRRKSPESQLNQRNGNQSQGTSFLKSTSTSIEKELDGDEEDKSKDGISIKDRKETQTTSKVTSPLAETSGTLKEAEKFTSKNPFFIINVTKKFLDQSRPNVPIDFVKKYLKQKQYAMVRFRNKLWPLKLLPYVTKKESIRLSTGWNLFAKASELQAGDVCIFELINMTNSEFDVHFFRSHS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2701 306 Gene3D - 1 89 IPR015300 -
Ahy10g2701 306 SUPERFAMILY DNA-binding pseudobarrel domain 203 304 IPR015300 -
Ahy10g2701 306 MobiDBLite consensus disorder prediction 156 182 - -
Ahy10g2701 306 CDD B3_DNA 12 86 IPR003340 GO:0003677
Ahy10g2701 306 MobiDBLite consensus disorder prediction 127 155 - -
Ahy10g2701 306 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 304 - -
Ahy10g2701 306 Pfam B3 DNA binding domain 209 304 IPR003340 GO:0003677
Ahy10g2701 306 Pfam B3 DNA binding domain 11 87 IPR003340 GO:0003677
Ahy10g2701 306 SMART B3_2 8 88 IPR003340 GO:0003677
Ahy10g2701 306 SMART B3_2 209 305 IPR003340 GO:0003677
Ahy10g2701 306 PANTHER B3 DOMAIN-CONTAINING 11 304 - -
Ahy10g2701 306 Gene3D - 190 305 IPR015300 -
Ahy10g2701 306 MobiDBLite consensus disorder prediction 118 191 - -
Ahy10g2701 306 CDD B3_DNA 208 303 IPR003340 GO:0003677
Ahy10g2701 306 ProSiteProfiles B3 DNA-binding domain profile. 209 305 IPR003340 GO:0003677
Ahy10g2701 306 SUPERFAMILY DNA-binding pseudobarrel domain 5 89 IPR015300 -
Ahy10g2701 306 ProSiteProfiles B3 DNA-binding domain profile. 1 88 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2701 Ahy-Chr10 116235346 116238633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2701 11 303 B3 DNA Binding Superfamily AT3G18990 26.140 1.31e-21 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2701 B3 6.20E-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2701 - - adu:107471968 610.912