Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2697 ATGCCTTTACATGAAAGAGGTTTCTTTAAAGTTCTTGTTCAAAGCTTTAAGCATGAGTTGAAAATTCCTAAACTTTTTGTGAAAGAATATTGGAGAGGAGTATCAAATCCTATAGTGTTAAAGCTACCAAACACTCTTAAACAAAGAGTATATTGGATTCAAAAGAATGAAGGTGAAATTTGGTTGGAAGAAGGTTGGGAACAAGTTGTGAAGGATTTTGGCTTAGAATATTCACAGTTTTTGACTTTTGATTATAAAGGATGGTCTTGCTTTGAAGTCAAAATATATCCTATGAAGGATTCTGAGATAATGCCTCCTCATCATCAAATATGTTTCTTTCAGATTCTTGCTCACAACAAGTTTTACCAAAAGCTGATGATTCCTAAATGTGCAAATGAATATTGGAAAAGAATGTCAAACCCTATAAAGTTGGTATTACCTTGTGGTAGTGTTGAGAGGAAAGTGATGTGGACCAAAAGAGGAGAAAATATTTGGTTGGAACAAGGTTGGGAAAAGGTTGTGGAGTTGTGTGGTTTGAGTTATGAGTGGTTGTTGACTTTTGACTACAATGGAAGGTCTAGTTTTGAAGTCAAAGTATATGATACCACTGGTTTAAGGGTAGCATATTATAATTTTGATGAGTATGATGTTGAGAATAACAAAGATGTTGATGAAACTGAGAGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATAATGATGATGATGATGATGATGATGAGGATGGTGATGATGATTTTGCTGAAGATTATTGTGATGAAGAATATCATCATTATGAGTTTGTTCAAGAACACTTCAAGAGAAAGAAGATCAACACAGTTAATGGGAGCAATAGGAATCCCAGTTTCAAGATTCGAATTCAAGAATCATATGTTGAGTCAAGATGCGTGGCAATACCAGCAACGTTTGCAAGGAAGCATTTGGAGGAAGGACCGATTCGTATGATTGTGGGTAACAGAGCTTGGACTGTGTGCTACAAAACTTGGAGAGGAAGGGCCAGATATCGCAAACACAAATTGCAAAGTGGGTGGCTCAGATTTAGAAGAGAGAACAATTTAGAGGTTGGTGATGTTTGTGTCTTTGAGTTAATTAGCAAATTTCCTCAGACAATGATCGTGAGAGTGCAGAGTGGATGA 1170 0.3607 MPLHERGFFKVLVQSFKHELKIPKLFVKEYWRGVSNPIVLKLPNTLKQRVYWIQKNEGEIWLEEGWEQVVKDFGLEYSQFLTFDYKGWSCFEVKIYPMKDSEIMPPHHQICFFQILAHNKFYQKLMIPKCANEYWKRMSNPIKLVLPCGSVERKVMWTKRGENIWLEQGWEKVVELCGLSYEWLLTFDYNGRSSFEVKVYDTTGLRVAYYNFDEYDVENNKDVDETESDDDDDDDDDDDDDDDNDDDDDDDEDGDDDFAEDYCDEEYHHYEFVQEHFKRKKINTVNGSNRNPSFKIRIQESYVESRCVAIPATFARKHLEEGPIRMIVGNRAWTVCYKTWRGRARYRKHKLQSGWLRFRRENNLEVGDVCVFELISKFPQTMIVRVQSG* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2697 389 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 106 - -
Ahy10g2697 389 SUPERFAMILY DNA-binding pseudobarrel domain 108 202 IPR015300 -
Ahy10g2697 389 Gene3D - 271 388 IPR015300 -
Ahy10g2697 389 PANTHER B3 DOMAIN-CONTAINING 7 106 - -
Ahy10g2697 389 ProSiteProfiles B3 DNA-binding domain profile. 5 99 IPR003340 GO:0003677
Ahy10g2697 389 PANTHER B3 DOMAIN-CONTAINING 109 379 - -
Ahy10g2697 389 CDD B3_DNA 292 386 IPR003340 GO:0003677
Ahy10g2697 389 SMART B3_2 112 203 IPR003340 GO:0003677
Ahy10g2697 389 SMART B3_2 294 387 IPR003340 GO:0003677
Ahy10g2697 389 SMART B3_2 8 99 IPR003340 GO:0003677
Ahy10g2697 389 Pfam B3 DNA binding domain 8 95 IPR003340 GO:0003677
Ahy10g2697 389 Pfam B3 DNA binding domain 294 386 IPR003340 GO:0003677
Ahy10g2697 389 SUPERFAMILY DNA-binding pseudobarrel domain 8 105 IPR015300 -
Ahy10g2697 389 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 109 379 - -
Ahy10g2697 389 SUPERFAMILY DNA-binding pseudobarrel domain 289 387 IPR015300 -
Ahy10g2697 389 ProSiteProfiles B3 DNA-binding domain profile. 293 389 IPR003340 GO:0003677
Ahy10g2697 389 CDD B3_DNA 8 97 IPR003340 GO:0003677
Ahy10g2697 389 MobiDBLite consensus disorder prediction 220 258 - -
Ahy10g2697 389 SUPERFAMILY ARM repeat 216 278 IPR016024 -
Ahy10g2697 389 Gene3D - 104 204 IPR015300 -
Ahy10g2697 389 Gene3D - 3 99 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2697 Ahy-Chr10 116215288 116217403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2697 105 375 B3 DNA Binding Superfamily AT3G18990 23.353 6.46e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2697 B3 5.10E-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2697 - - ahf:112718388 752.281