Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2695 ATGTCTTCTCAAGAACGTGATGTCGTTCACTTCTTCAAGGTTATTCTTGAAAAGAACCTTCTTGGTGATGGATTTCTGAGATTGCCAAAGAATTTTGTGCATAAATACTGGAAAGAAATTACGTCACGTTCTGTTTTTCTAAGTCTTCCAAACGGAGCTGAATTGGAAGTTCATTGGTCAAGGGATGAAAACGGTGACGTTTTGTTTGGCCACGGTTGGAAAGAATTTGCACAATACGTGTCTCTCCAAGCGACACAGTTTCTCTTGTTCCGTTACGAAGTGAAAAAAACTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGTTTTATGTTATAGTTTTGGGTTCAAGTGGTTTAGAAATTAAGTACCCTTGTTCTAATTCCGTGTCAAAGAAAAAAAATGATAATGTTAATGTTAATGTTGTTGAAAAAGGGGAAAAGAGTGAAAAAAAGAGTGATGCTTGTTCTTTTGAGTTTGTTAATGGAAAAAGACGAAAATCTCTCTTGACACCGTTACAATCACCACCTCCACCACCACCTCTGGTAATTTCCGATGATGAAACCAATAGTTTCAAAAGGAAGAAAATTATAAAAGAAGAGCCTGAAGATTACTCTATTATTGATGGTGAAATCAATAACACTAAAAGAAAAAGGAGAGCTTCTAGGAGTTTTGATTATATTGCCAAGGAAAAAGATTATGAAGTGTTGGACAATAAAACCATGAAGAAGTTTCAAGAGAAAGTGAAGAGTAGGTTCCAAACTGGGAATCCCTTTTTTGTATGTGCACTTGGGAAAACCTATTCTGACAGAGACCTCTTGGTTATACCAAGCTATTTTGCTAAACCAATTCTTGGGAAAAGAGAAGGAAATGCAAAGCTCTTTCTTGTTGATGATCCGAAGAAATGTTGGGATGTGCAGATGAGAATTTCTGCTTGCAGACAATTTATAATTACAAATGGTTGGAAGAAATTCTCAACATTCTATAATTTGAAACTTGGTGATGCTTGTGTCTTTGAGTTGGTCGATCCAATCGATATTTTATTCAAAGTTCATATTCGTAGTTATGGAGAAGACCCTTTGACTCCTAGCTCTTCTGGTGATACCAACTGA 1149 0.3386 MSSQERDVVHFFKVILEKNLLGDGFLRLPKNFVHKYWKEITSRSVFLSLPNGAELEVHWSRDENGDVLFGHGWKEFAQYVSLQATQFLLFRYEVKKTNNNNNNNNNNNNNNNNNNNNNNNKFYVIVLGSSGLEIKYPCSNSVSKKKNDNVNVNVVEKGEKSEKKSDACSFEFVNGKRRKSLLTPLQSPPPPPPLVISDDETNSFKRKKIIKEEPEDYSIIDGEINNTKRKRRASRSFDYIAKEKDYEVLDNKTMKKFQEKVKSRFQTGNPFFVCALGKTYSDRDLLVIPSYFAKPILGKREGNAKLFLVDDPKKCWDVQMRISACRQFIITNGWKKFSTFYNLKLGDACVFELVDPIDILFKVHIRSYGEDPLTPSSSGDTN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2695 382 ProSiteProfiles B3 DNA-binding domain profile. 11 130 IPR003340 GO:0003677
Ahy10g2695 382 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 4 94 - -
Ahy10g2695 382 ProSiteProfiles B3 DNA-binding domain profile. 271 367 IPR003340 GO:0003677
Ahy10g2695 382 CDD B3_DNA 286 367 IPR003340 GO:0003677
Ahy10g2695 382 SUPERFAMILY DNA-binding pseudobarrel domain 265 367 IPR015300 -
Ahy10g2695 382 SMART B3_2 11 101 IPR003340 GO:0003677
Ahy10g2695 382 SMART B3_2 272 369 IPR003340 GO:0003677
Ahy10g2695 382 Pfam B3 DNA binding domain 11 94 IPR003340 GO:0003677
Ahy10g2695 382 Pfam B3 DNA binding domain 280 366 IPR003340 GO:0003677
Ahy10g2695 382 PANTHER B3 DOMAIN-CONTAINING 118 366 - -
Ahy10g2695 382 Gene3D - 250 368 IPR015300 -
Ahy10g2695 382 Gene3D - 2 102 IPR015300 -
Ahy10g2695 382 SUPERFAMILY DNA-binding pseudobarrel domain 5 93 IPR015300 -
Ahy10g2695 382 MobiDBLite consensus disorder prediction 98 119 - -
Ahy10g2695 382 PANTHER B3 DOMAIN-CONTAINING 4 94 - -
Ahy10g2695 382 CDD B3_DNA 10 93 IPR003340 GO:0003677
Ahy10g2695 382 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 118 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2695 Ahy-Chr10 116189684 116192777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2695 11 363 B3 DNA Binding Superfamily AT3G18990 25.824 1.61e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2695 B3 7.30E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2695 - - ahf:112717071 665.611