Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2694 ATGGCTTTCTATAACATGTTTTTTAAGGTTCTTATTGATCCCAACCAACTGAGGGAAAACCAACCAAAATGGAAGAAGCCGTCTACACTTCATGAATTGGAGATACCACCAAAGTTTGTAGAGAAAAATTGGAAAAAATTATCAAATCCGTTATTGTTGGAGCTACCAACCGGAGATAAAACAGAAGTAAAATGGGTCAAGAAAAAAAATAATAGCGTTTGGTTAAATGAAGGTTGGAGAAGAGTTGTGGAATTGTTAAAACTAAAGCATGGATGTTTTGTGACTTTTAAATATAATGGGAAATCGAAATTTGAACTCATGGTGTTTCATCCGAATACTTTAGAAATTGATTACTCAAGTGTGAGAGGTTTCTATAACGATGATCATCATCAAGGTGCAAATGAAAATGATGATGATGGTGGTGATGATGATGATGACTCTATTGAGATTATTGCTGAAGAGCCAGAACAATTCAACAACAGAAGCAGAGAAGGAACTTGTAAAAGCATGCTCAAAGAAGTTCATGAAAATCATGACTATATTGTAATTGATGATGATGATGATGATGATGAATGGCACTCTAAACCACTCTTGATGAGAAAGAGAACCAAAACAAAAGGAACAAGTAAAAGCATCCTCAAAAAAGTGAGGAGAAATATGAAATGTGATGATAACCGGAGCAAGGCACTGGAGAGGGCTGAAGCCATCTCTTCAAAGCTGAAAAATCCTTCTTTTGTTCGTGATTTGAAGCGTTCATATGTTGATTACGGGATCATGCAAATACCATGTTCATTTTCGGAACAATATTTATATAGATTAAAAGGAAGTGGCACAATTTGGGTTAGTGATAATGAAGACATTAAATGGAGCATCAAATACAGTTACAGTGATTCTCAGAACAGAACAAGTATTTATGGTGATTGGCACAAATTTAGAAAAGAAAACGAGTTAGAAGTTGGTGATGTTTGTGTATTCGAAATGATGACGGAAGTTGAACCCGTTTCCTTCAAAATTTACATCATCCGAGTCAGACAAGAATCATCATCATCTTATCCTCATCAATTCCAAGAGTCCGAAAGGCCCAATAGGCAGGCGAATAATCAATTCGAGCTTCTGATAACAAAATCAAAATTGAAGGCATCAACACTCGTGAAAATACCAAGAAAGTTTATTCGCCAGAATGAAAGATGTGTTGGAAAAGATGTGACACTTAAAGTTGGAAAAGAATTGTGGACTGTGAAAGTGTTGAATTCTGGTTCGTTTTGTAAAGGTTGGATTCAGTTCGCAAGAGAATGCAAATTAGTTGTTGGAGATATTTGTCATTTTGAACTCACTGACCCCACTAATTTTGTGTTCCATGTTTCCATTTCTAGGGAGGAGCATGGTTCATGA 1392 0.3585 MAFYNMFFKVLIDPNQLRENQPKWKKPSTLHELEIPPKFVEKNWKKLSNPLLLELPTGDKTEVKWVKKKNNSVWLNEGWRRVVELLKLKHGCFVTFKYNGKSKFELMVFHPNTLEIDYSSVRGFYNDDHHQGANENDDDGGDDDDDSIEIIAEEPEQFNNRSREGTCKSMLKEVHENHDYIVIDDDDDDDEWHSKPLLMRKRTKTKGTSKSILKKVRRNMKCDDNRSKALERAEAISSKLKNPSFVRDLKRSYVDYGIMQIPCSFSEQYLYRLKGSGTIWVSDNEDIKWSIKYSYSDSQNRTSIYGDWHKFRKENELEVGDVCVFEMMTEVEPVSFKIYIIRVRQESSSSYPHQFQESERPNRQANNQFELLITKSKLKASTLVKIPRKFIRQNERCVGKDVTLKVGKELWTVKVLNSGSFCKGWIQFARECKLVVGDICHFELTDPTNFVFHVSISREEHGS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2694 463 MobiDBLite consensus disorder prediction 127 147 - -
Ahy10g2694 463 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 357 459 - -
Ahy10g2694 463 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 22 343 - -
Ahy10g2694 463 SUPERFAMILY DNA-binding pseudobarrel domain 27 119 IPR015300 -
Ahy10g2694 463 PANTHER B3 DOMAIN-CONTAINING 357 459 - -
Ahy10g2694 463 PANTHER B3 DOMAIN-CONTAINING 22 343 - -
Ahy10g2694 463 ProSiteProfiles B3 DNA-binding domain profile. 369 460 IPR003340 GO:0003677
Ahy10g2694 463 Pfam B3 DNA binding domain 370 458 IPR003340 GO:0003677
Ahy10g2694 463 Pfam B3 DNA binding domain 252 342 IPR003340 GO:0003677
Ahy10g2694 463 Pfam B3 DNA binding domain 30 108 IPR003340 GO:0003677
Ahy10g2694 463 ProSiteProfiles B3 DNA-binding domain profile. 33 112 IPR003340 GO:0003677
Ahy10g2694 463 CDD B3_DNA 369 458 IPR003340 GO:0003677
Ahy10g2694 463 ProSiteProfiles B3 DNA-binding domain profile. 244 344 IPR003340 GO:0003677
Ahy10g2694 463 Gene3D - 4 113 IPR015300 -
Ahy10g2694 463 Gene3D - 222 346 IPR015300 -
Ahy10g2694 463 Gene3D - 353 461 IPR015300 -
Ahy10g2694 463 SUPERFAMILY DNA-binding pseudobarrel domain 366 458 IPR015300 -
Ahy10g2694 463 SUPERFAMILY DNA-binding pseudobarrel domain 241 334 IPR015300 -
Ahy10g2694 463 CDD B3_DNA 243 342 IPR003340 GO:0003677
Ahy10g2694 463 SMART B3_2 245 344 IPR003340 GO:0003677
Ahy10g2694 463 SMART B3_2 7 112 IPR003340 GO:0003677
Ahy10g2694 463 SMART B3_2 369 460 IPR003340 GO:0003677
Ahy10g2694 463 CDD B3_DNA 6 109 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2694 Ahy-Chr10 116176931 116180580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2694 28 328 B3 DNA Binding Superfamily AT3G18990 26.829 1.19e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy10g2694 B3 1.20E-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2694 - - aip:107621190 782.711