Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2649 ATGCAAAACCAAGTGTACAACAGCTACGTGAAGCTGCTCGCATTCGATCTTCTCTCTCTCACCCAAACCCCTTCTTCTTCTTCGTCGGTTTCAGAACCTACGTTCTCCCGCAGAGGCATCCCTCTCTCTCGTGCAGAGACACTTGGGACTGTTACATTCCGTGACCACAAGCCACATAAGTTCCTCCGCTTTCTCATCGACGACGGCACCGCCTCCGTCCCCTGCATCCTCTGGCTCAACCACATGACTTCACCCTACCTTGCTCGCCGCCGCCGCCCCGACGACCTCCGCCTCATCGCAGATTCGTCCGCCAGGTTTGCCGCTGAGGTTAGGGTTGGGGTGGTGGCGAGGGTGAGGGGCAGGATCGGGTGCTACAACGGGAAGGTGCAGCTCACGGTTTCCGATGTTGTGGTTGAGAGGGATCCCAATGCTGAGATACTCCACTGGCTCGACTGTATCAACCTTGCTCGTAACTGCTACAACGTTTTGCCTGGACCCGGGCCCGGGCCCGGCCCGTCTTCGGCATGCAAGGAGAATCAAGCAGAATGA 549 0.5774 MQNQVYNSYVKLLAFDLLSLTQTPSSSSSVSEPTFSRRGIPLSRAETLGTVTFRDHKPHKFLRFLIDDGTASVPCILWLNHMTSPYLARRRRPDDLRLIADSSARFAAEVRVGVVARVRGRIGCYNGKVQLTVSDVVVERDPNAEILHWLDCINLARNCYNVLPGPGPGPGPSSACKENQAE* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2649 182 PANTHER CST COMPLEX SUBUNIT STN1 5 163 - -
Ahy10g2649 182 Gene3D - 3 163 IPR012340 -
Ahy10g2649 182 SUPERFAMILY Nucleic acid-binding proteins 27 154 IPR012340 -
Ahy10g2649 182 Pfam OB-fold nucleic acid binding domain 49 137 IPR004365 GO:0003676
Ahy10g2649 182 PANTHER REPLICATION PROTEIN A-RELATED 5 163 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2649 Ahy-Chr10 115857289 115858170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2649 39 155 Core DNA Replication Machinery Family AT2G24490 27.350 6.93e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2649 K23312 - vvi:100852748 199.134