Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2644 ATGTTGCTATTTCTTGTTCGTTGGTGGATTTGTGTGTTTGTGGTGTTAAATTCAGGAGCTGTTAATGGTCAGTATTATCGAACTGTTGGAGACAAAATCCTTCCATATAACAAAATTATTGTGGATTCTTTGGGACATGGCAACTTCTTTACAATTCAATCTGCCATTGATTCAGTCCCTTCCAACAATAAATATTGGATTTTAATCAATGTGAAGGCTGGTATTTACAGGGAAAAAGTGACAATTCCAATTGATAAACCATACATAATATTGAAGGGAAGTGGAAAGATGAAAACGTGGGTTGAATGGGATGACCATAATACAACTGCTCAGAGCCCCACCTTCCAATCCAATGCTGATAATATCGTCGTCAAATCCATCTCTTTTAGGAATACATACAACAATCCCATAAATACGAACCCTAGGGTTCCTGCAGTAGCTGCAATGATAAGCGGAGATAAATCTTATTTTTATAGAGTTGGATTTTTTGGTTTGCAAGATACTTTGTGGGATAATTATGGAAAACATTATTATAAACTTTGTACTATTCAAGGGGCGGTTGATTTTATCTTCGGTGCTGGCCAGTCATTATTTGAGAGATGTGGCATAAATGTGATTGGAAGGGCATTAGAAGAAGGTTTTATAGGATATATAACAGCACAAGGAAGAGAAAATCCAAAAGATTCAAATGGATTTGTATTTAAAAATTGTAATGTCTTTGGAGATGGTTCTACTTTTTTGGGAAGACCTTGGAGACCTTACGCCAGCGTTCTTTTCTACAATACAAGTATGGCCAACATTATTCAACCCGCTGGTTGGGATCCATGGGATTCCTCTCAATATGAGGATAATATTATGTTTGCAGAGTATAACAATTTTGGACCAGGTTCTGATACCTCCAATCGAGTAAATTGGATTACAAAATTGGATTTAGAGACGGTTAATACGATGACAAATATAACTTTCATAGACTCTGAAGGATGGATTCAGAAGAGCCAACGATTTAAAAAAAAACATTATCAATAG 1026 0.3587 MLLFLVRWWICVFVVLNSGAVNGQYYRTVGDKILPYNKIIVDSLGHGNFFTIQSAIDSVPSNNKYWILINVKAGIYREKVTIPIDKPYIILKGSGKMKTWVEWDDHNTTAQSPTFQSNADNIVVKSISFRNTYNNPINTNPRVPAVAAMISGDKSYFYRVGFFGLQDTLWDNYGKHYYKLCTIQGAVDFIFGAGQSLFERCGINVIGRALEEGFIGYITAQGRENPKDSNGFVFKNCNVFGDGSTFLGRPWRPYASVLFYNTSMANIIQPAGWDPWDSSQYEDNIMFAEYNNFGPGSDTSNRVNWITKLDLETVNTMTNITFIDSEGWIQKSQRFKKKHYQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2644 341 PANTHER PECTINESTERASE 10-RELATED 13 332 - -
Ahy10g2644 341 Pfam Pectinesterase 39 325 IPR000070 GO:0030599|GO:0042545
Ahy10g2644 341 SUPERFAMILY Pectin lyase-like 37 331 IPR011050 -
Ahy10g2644 341 Gene3D - 35 338 IPR012334 -
Ahy10g2644 341 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 332 - -
Ahy10g2644 341 ProSitePatterns Pectinesterase signature 2. 183 192 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2644 Ahy-Chr10 115840817 115842964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2644 39 282 Carbohydrate Esterase AT2G19150 47.347 2.50e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2644 - - ahf:112786588 637.876