Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2639 ATGTGTCTTCCCTCCCTTTCATATCTCTGTAAAATAGCAATAGTATTGTTGGTGGGAGGTTTAGGAGAAGAAGAAATAGCAAAAGCTCAGTTTCACCAAAGAAATCATGGAGATATCCATAACAAACTCCTTCCTTATTTGACAGTTTCTGTTGACCAATCTGGCCATGCTAACTTCTCTACAATTCAATCTGCAATTGATTCAGTCCCTTCCAACAATAAGCATTGGGTTTTAATCAATGTTAAGGCTGGTATTTACAGGGAAAAGTTGAAGATTCCATATGAGAAGCCATATATAATTTTGAAAGGAGAGGGAAAAAGGAACACTCTTGTTGACTGGGATGACCATGCTACCACCTCACAGAGCCCTACATTCTCAACAATGGCTGACAATGTTGTTGTCAAGTCCATCAGTTTTAGGAATTCATACAATAATCCAAGGAATAGTAATCCAATTGAACCTGCAGTAGCTGCAATGGTAAGTGGGGATAAATCATATTTCTATGATGTTGGCTTTTATGGTCTTCAAGATACTTTGTGGGATGACCAAAGAAGACATTACTATAAGTTTTGCACTATTCAAGGTGCTGTTGATTTTATTTTTGGTGCTGGCCAATCTTTATATGAGGGATGTAGCATATCTGTTGTTGGAGCGTCCCTAGATCCTGGTTATGTTGGTTTTATCACAGCACAAGGAAGAACAAATTTAAATGATGCAAATGGGTTTGTATTCAAAAATTGTAAAATATTTGGAAATGGAACCACATTCTTAGGAAGACCATGGAGAGGTTACGCAAGAGTTCTTTTTTATAACACAAGCATGTCTAACGTTATACTACCAACAGGTTGGGATCCATGGAATTTCAATCATCATGAGAATCGCGTAACTTTCGCAGAGTATAAGAATTTTGGACCCGGTTCTAACATTTCATTGCGAGTGAAGTGGAGTAAGAAGCTTAGTTTAGCAACAATTAAATCAATGATTAGCACTAAGTTCATTGACAATGAAGGTTGGCTTAAGGCACAAGACTTCTAA 1035 0.3729 MCLPSLSYLCKIAIVLLVGGLGEEEIAKAQFHQRNHGDIHNKLLPYLTVSVDQSGHANFSTIQSAIDSVPSNNKHWVLINVKAGIYREKLKIPYEKPYIILKGEGKRNTLVDWDDHATTSQSPTFSTMADNVVVKSISFRNSYNNPRNSNPIEPAVAAMVSGDKSYFYDVGFYGLQDTLWDDQRRHYYKFCTIQGAVDFIFGAGQSLYEGCSISVVGASLDPGYVGFITAQGRTNLNDANGFVFKNCKIFGNGTTFLGRPWRGYARVLFYNTSMSNVILPTGWDPWNFNHHENRVTFAEYKNFGPGSNISLRVKWSKKLSLATIKSMISTKFIDNEGWLKAQDF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2639 344 ProSitePatterns Pectinesterase signature 2. 193 202 IPR033131 -
Ahy10g2639 344 SUPERFAMILY Pectin lyase-like 47 341 IPR011050 -
Ahy10g2639 344 Gene3D - 46 344 IPR012334 -
Ahy10g2639 344 PANTHER PECTINESTERASE 10-RELATED 36 343 - -
Ahy10g2639 344 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 343 - -
Ahy10g2639 344 Pfam Pectinesterase 49 333 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2639 Ahy-Chr10 115810232 115814268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2639 48 292 Carbohydrate Esterase AT2G19150 45.935 1.78e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2639 - - gmx:100819252 453.366